Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02273

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
2,532,641	+				+0.1
2,532,649	-				-1.0
2,532,660	+				+0.4
2,532,663	-				+0.1
2,532,704	+		MIT1002_02273	0.17	+0.6
2,532,714	+		MIT1002_02273	0.20	+0.6
2,532,789	+		MIT1002_02273	0.36	+0.9
2,532,872	+		MIT1002_02273	0.54	+1.3
2,532,892	-		MIT1002_02273	0.58	+1.1
2,532,901	+		MIT1002_02273	0.60	+0.1
2,532,954	-		MIT1002_02273	0.72	-0.1
2,532,965	+		MIT1002_02273	0.74	-0.2
2,533,046	+				+2.1
2,533,049	-				+0.7
2,533,116	+				+1.4
2,533,177	+				-0.5
2,533,185	-		MIT1002_02274	0.10	+1.0
2,533,257	+		MIT1002_02274	0.20	-0.1
2,533,344	-		MIT1002_02274	0.31	-0.7
2,533,369	+		MIT1002_02274	0.34	-0.1
2,533,400	-		MIT1002_02274	0.38	-0.4
2,533,424	-		MIT1002_02274	0.41	-1.0
2,533,424	-		MIT1002_02274	0.41	-1.2
2,533,424	-		MIT1002_02274	0.41	-1.1
2,533,549	-		MIT1002_02274	0.58	-0.1
2,533,635	+		MIT1002_02274	0.69	-0.5
2,533,643	-		MIT1002_02274	0.70	+0.2
2,533,679	-		MIT1002_02274	0.75	-0.6
2,533,679	-		MIT1002_02274	0.75	-0.0
2,533,769	+		MIT1002_02274	0.87	-1.8
2,533,823	+				+0.2
2,533,823	+				+0.4
2,533,831	-				-0.8
2,533,831	-				-0.2
2,533,951	-				+0.1
2,533,951	-				+0.5
2,533,967	+				+0.6
2,533,975	-				+2.2
2,534,015	-				+1.9
2,534,036	+		MIT1002_02275	0.12	-0.2
2,534,036	+		MIT1002_02275	0.12	-0.1
2,534,044	-		MIT1002_02275	0.13	+1.2