Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02262

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
2,515,347	+				+0.8
2,515,352	+				+1.3
2,515,354	-				-2.0
2,515,359	+				+1.0
2,515,360	-				-0.6
2,515,360	-				-0.5
2,515,373	+				+0.4
2,515,509	+				+0.9
2,515,519	-				+0.3
2,515,524	-				+1.4
2,515,538	+				+1.0
2,515,538	+				+1.1
2,515,538	+				-0.1
2,515,727	+		MIT1002_02261	0.36	-0.9
2,515,727	+		MIT1002_02261	0.36	+1.0
2,515,734	+		MIT1002_02261	0.38	-0.6
2,515,735	-		MIT1002_02261	0.38	-3.3
2,515,735	-		MIT1002_02261	0.38	-0.2
2,515,787	+		MIT1002_02261	0.47	-2.5
2,515,848	+		MIT1002_02261	0.57	+0.0
2,515,856	-		MIT1002_02261	0.59	-0.9
2,515,856	-		MIT1002_02261	0.59	-1.2
2,515,938	+		MIT1002_02261	0.73	-0.8
2,515,946	-		MIT1002_02261	0.74	-1.5
2,515,960	-		MIT1002_02261	0.76	-1.7
2,516,042	+				+0.0
2,516,250	+				+0.7
2,516,253	+				-1.8
2,516,261	-				+1.2
2,516,346	-				-0.8
2,516,354	+				-1.6
2,516,364	+				-3.0
2,516,372	-				-0.5
2,516,631	+		MIT1002_02262	0.13	+0.4
2,516,639	-		MIT1002_02262	0.14	-1.5
2,516,720	+		MIT1002_02262	0.17	-0.1
2,516,781	+		MIT1002_02262	0.19	+0.4
2,516,789	-		MIT1002_02262	0.20	+1.0
2,516,868	-		MIT1002_02262	0.23	+0.3
2,516,919	-		MIT1002_02262	0.25	+0.1
2,516,957	-		MIT1002_02262	0.26	-1.9
2,516,957	-		MIT1002_02262	0.26	+1.3
2,516,957	-		MIT1002_02262	0.26	-0.6
2,517,073	-		MIT1002_02262	0.31	+0.2
2,517,182	-		MIT1002_02262	0.35	-1.2
2,517,210	+		MIT1002_02262	0.36	-0.6
2,517,215	+		MIT1002_02262	0.37	+0.9
2,517,223	-		MIT1002_02262	0.37	-0.3
2,517,241	-		MIT1002_02262	0.38	-0.2
2,517,380	-		MIT1002_02262	0.43	+0.6
2,517,396	-		MIT1002_02262	0.44	+1.0
2,517,424	+		MIT1002_02262	0.45	+0.1
2,517,424	+		MIT1002_02262	0.45	+0.7
2,517,452	+		MIT1002_02262	0.46	-0.6
2,517,458	+		MIT1002_02262	0.46	+0.9
2,517,581	-		MIT1002_02262	0.51	-0.4
2,517,586	-		MIT1002_02262	0.51	-1.2
2,517,654	+		MIT1002_02262	0.54	-0.6
2,517,654	-		MIT1002_02262	0.54	-1.0
2,517,662	-		MIT1002_02262	0.54	-0.7
2,517,662	-		MIT1002_02262	0.54	+1.2
2,517,670	+		MIT1002_02262	0.55	+1.6
2,517,681	+		MIT1002_02262	0.55	-3.1
2,517,681	+		MIT1002_02262	0.55	-1.5
2,517,716	-		MIT1002_02262	0.57	+0.0
2,517,942	-		MIT1002_02262	0.66	+0.4
2,517,980	-		MIT1002_02262	0.67	-1.5
2,517,998	+		MIT1002_02262	0.68	-1.4
2,518,004	-		MIT1002_02262	0.68	+0.3
2,518,004	-		MIT1002_02262	0.68	+0.4
2,518,010	+		MIT1002_02262	0.68	+0.2
2,518,044	+		MIT1002_02262	0.70	+0.4
2,518,044	+		MIT1002_02262	0.70	+0.3
2,518,044	+		MIT1002_02262	0.70	+0.5
2,518,052	-		MIT1002_02262	0.70	-1.7
2,518,052	-		MIT1002_02262	0.70	-0.1
2,518,115	+		MIT1002_02262	0.73	-2.9
2,518,222	+		MIT1002_02262	0.77	+0.6
2,518,236	+		MIT1002_02262	0.77	-1.8
2,518,244	-		MIT1002_02262	0.78	+0.1
2,518,269	-		MIT1002_02262	0.79	-1.3
2,518,335	+		MIT1002_02262	0.81	+0.7
2,518,337	+		MIT1002_02262	0.82	-0.8
2,518,345	-		MIT1002_02262	0.82	+2.1
2,518,345	-		MIT1002_02262	0.82	-1.0
2,518,345	-		MIT1002_02262	0.82	-0.2
2,518,479	-		MIT1002_02262	0.87	+0.0
2,518,479	-		MIT1002_02262	0.87	-0.5
2,518,558	+				+0.8
2,518,558	+				+1.3
2,518,565	+				+0.2
2,518,565	-				+0.3
2,518,566	-				-0.8
2,518,566	-				+0.5
2,518,566	-				-1.3
2,518,566	-				-0.0
2,518,566	-				+1.1
2,518,573	-				+1.7
2,518,639	+				-3.3
2,518,639	+				-1.0
2,518,639	+				-0.5
2,518,639	+				-0.6
2,518,639	+				+0.2
2,518,639	+				-2.2
2,518,639	+				+1.0
2,518,639	+				+0.3
2,518,639	+				-0.1
2,518,639	+				-0.5
2,518,647	-				+0.7
2,518,647	-				-0.4
2,518,647	-				+0.0
2,518,647	-				-1.0
2,518,647	-				-0.2
2,518,647	-				-1.4
2,518,647	-				-1.3
2,518,647	-				-0.3
2,518,647	-				-0.7
2,518,667	-				-1.7
2,518,677	-				+0.8
2,518,777	-				+0.5
2,518,971	-				+0.2
2,518,988	+				-0.9
2,519,026	+				+0.9
2,519,056	+		MIT1002_02263	0.15	-1.8
2,519,056	+		MIT1002_02263	0.15	+0.8
2,519,073	+		MIT1002_02263	0.18	-0.9
2,519,081	-		MIT1002_02263	0.19	+0.3
2,519,081	-		MIT1002_02263	0.19	-1.9
2,519,081	-		MIT1002_02263	0.19	+0.3
2,519,139	+		MIT1002_02263	0.30	-0.5
2,519,193	+		MIT1002_02263	0.39	+0.3
2,519,282	+		MIT1002_02263	0.55	+1.5
2,519,282	+		MIT1002_02263	0.55	+0.9
2,519,282	+		MIT1002_02263	0.55	-0.6
2,519,317	-		MIT1002_02263	0.62	+1.0
2,519,433	-		MIT1002_02263	0.83	-1.7
2,519,433	-		MIT1002_02263	0.83	+1.4
2,519,462	-		MIT1002_02263	0.88	+1.1
2,519,490	-				-0.0
2,519,502	+				+0.3
2,519,502	+				+0.5
2,519,510	-				+1.8
2,519,510	-				+0.3
2,519,514	+				-1.2
2,519,539	+				-0.6
2,519,547	-				-0.9
2,519,549	+				+0.3
2,519,557	-				-0.1
2,519,557	-				+0.8
2,519,557	-				+1.5
2,519,561	+				+0.3
2,519,597	-				+0.5
2,519,651	-				-2.5
2,519,698	+				-0.4
2,519,706	-				+0.6