Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02210

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
2,469,120	+		MIT1002_02208	0.46	-0.7
2,469,128	-		MIT1002_02208	0.47	-0.2
2,469,172	+		MIT1002_02208	0.55	+0.7
2,469,540	+		MIT1002_02209	0.29	+0.5
2,469,545	+		MIT1002_02209	0.30	-0.2
2,469,545	+		MIT1002_02209	0.30	+0.3
2,469,545	+		MIT1002_02209	0.30	+0.6
2,469,545	+		MIT1002_02209	0.30	-0.4
2,469,545	+		MIT1002_02209	0.30	+0.4
2,469,545	+		MIT1002_02209	0.30	-1.6
2,469,551	+		MIT1002_02209	0.32	-1.1
2,469,553	-		MIT1002_02209	0.32	-1.6
2,469,559	-		MIT1002_02209	0.33	+0.3
2,469,669	-		MIT1002_02209	0.57	+1.8
2,469,683	+		MIT1002_02209	0.60	-0.7
2,469,683	+		MIT1002_02209	0.60	-0.1
2,469,726	-		MIT1002_02209	0.69	+0.4
2,469,827	+				-0.0
2,469,840	+				-1.3
2,469,872	+				+0.3
2,469,962	+				+0.3
2,469,995	+				-0.7
2,470,069	-				+1.1
2,470,092	-				-1.5
2,470,097	-				-0.3
2,470,131	+				+0.9
2,470,149	+		MIT1002_02210	0.11	-2.4
2,470,149	+		MIT1002_02210	0.11	+0.5
2,470,149	-		MIT1002_02210	0.11	-1.4
2,470,157	-		MIT1002_02210	0.12	-0.7
2,470,157	-		MIT1002_02210	0.12	+0.6
2,470,203	+		MIT1002_02210	0.16	-1.3
2,470,246	-		MIT1002_02210	0.20	-0.4
2,470,328	+		MIT1002_02210	0.28	-2.2
2,470,328	+		MIT1002_02210	0.28	-0.7
2,470,393	+		MIT1002_02210	0.34	-0.5
2,470,663	-		MIT1002_02210	0.59	-1.7
2,470,808	+		MIT1002_02210	0.73	-0.4
2,470,808	+		MIT1002_02210	0.73	-2.5
2,470,841	+		MIT1002_02210	0.76	-1.7
2,470,859	-		MIT1002_02210	0.77	+0.4
2,470,899	-		MIT1002_02210	0.81	+0.6
2,470,919	+		MIT1002_02210	0.83	-0.9
2,470,981	+		MIT1002_02210	0.89	-1.1
2,470,982	-		MIT1002_02210	0.89	-0.1
2,471,004	-				-3.4
2,471,014	+				-0.3
2,471,133	-				-1.5
2,471,160	-				-0.1
2,471,164	+				+0.7
2,471,393	+				-0.9
2,471,415	-				-1.9
2,471,415	-				+0.2
2,471,417	+				+1.2
2,471,425	-				-0.2
2,471,425	-				+1.6
2,471,426	-				+0.1
2,471,496	+				-0.1
2,471,496	+				-0.1
2,471,687	+		MIT1002_02211	0.16	-1.5
2,471,691	-		MIT1002_02211	0.17	-1.2
2,471,807	+		MIT1002_02211	0.25	-2.6
2,471,807	+		MIT1002_02211	0.25	+0.1
2,471,807	+		MIT1002_02211	0.25	+0.8
2,471,807	+		MIT1002_02211	0.25	-1.5
2,471,807	+		MIT1002_02211	0.25	-2.2
2,471,815	-		MIT1002_02211	0.25	-0.3
2,471,815	-		MIT1002_02211	0.25	-1.4
2,471,816	-		MIT1002_02211	0.25	+0.8
2,471,884	-		MIT1002_02211	0.30	-1.4
2,471,904	-		MIT1002_02211	0.31	-1.2
2,471,919	+		MIT1002_02211	0.32	-2.5
2,471,924	+		MIT1002_02211	0.33	+1.7
2,471,930	+		MIT1002_02211	0.33	-0.5
2,471,932	-		MIT1002_02211	0.33	-1.0
2,471,932	-		MIT1002_02211	0.33	-1.0
2,471,932	-		MIT1002_02211	0.33	+0.3
2,471,932	-		MIT1002_02211	0.33	-3.1
2,471,976	-		MIT1002_02211	0.36	+0.5
2,471,981	-		MIT1002_02211	0.36	+0.5