Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02178

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
2,432,675	-		MIT1002_02177	0.22	-0.7
2,432,737	-		MIT1002_02177	0.38	-0.6
2,432,754	-		MIT1002_02177	0.42	+0.1
2,432,754	-		MIT1002_02177	0.42	-1.9
2,432,754	-		MIT1002_02177	0.42	-1.1
2,432,754	-		MIT1002_02177	0.42	+0.3
2,432,963	+				-0.8
2,433,045	+				+0.3
2,433,058	+				-0.2
2,433,128	+				-0.3
2,433,128	+				-1.4
2,433,128	+				-0.7
2,433,177	-				-0.2
2,433,298	-		MIT1002_02178	0.19	-0.4
2,433,404	+		MIT1002_02178	0.27	+0.5
2,433,412	-		MIT1002_02178	0.28	+0.4
2,433,428	-		MIT1002_02178	0.29	-0.1
2,433,447	+		MIT1002_02178	0.31	+1.6
2,433,447	-		MIT1002_02178	0.31	+0.9
2,433,457	+		MIT1002_02178	0.31	-1.2
2,433,465	-		MIT1002_02178	0.32	-0.1
2,433,465	-		MIT1002_02178	0.32	+0.5
2,433,490	-		MIT1002_02178	0.34	+0.0
2,433,617	-		MIT1002_02178	0.44	+0.4
2,433,652	+		MIT1002_02178	0.46	-0.1
2,433,686	+		MIT1002_02178	0.49	-2.8
2,433,722	+		MIT1002_02178	0.52	+0.2
2,433,813	+		MIT1002_02178	0.58	+1.8
2,433,816	-		MIT1002_02178	0.59	+0.7
2,433,888	-		MIT1002_02178	0.64	-0.4
2,433,890	-		MIT1002_02178	0.64	+1.0
2,433,906	+		MIT1002_02178	0.66	+0.3
2,433,949	-		MIT1002_02178	0.69	+0.8
2,434,078	+		MIT1002_02178	0.79	+0.7
2,434,109	+		MIT1002_02178	0.81	-1.1
2,434,117	-		MIT1002_02178	0.82	+1.3
2,434,136	+		MIT1002_02178	0.83	-0.4
2,434,189	+		MIT1002_02178	0.87	-0.8
2,434,259	-				-0.1
2,434,282	+				-1.6
2,434,282	+				+0.4
2,434,287	+				-0.4
2,434,290	-				+0.3
2,434,292	+				+0.5
2,434,292	+				-1.6
2,434,293	-				+0.9
2,434,295	-				-0.9
2,434,300	-				-0.5
2,434,300	-				-0.1
2,434,300	-				-4.1
2,434,300	-				-0.5
2,434,300	-				-1.7
2,434,300	-				+0.3
2,434,300	-				+0.0
2,434,300	-				-0.1
2,434,300	-				+1.4
2,434,340	+				-2.7
2,434,345	+				-0.1