Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02159

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
2,416,057	+		MIT1002_02158	0.49	+1.3
2,416,072	-		MIT1002_02158	0.50	+2.0
2,416,073	+		MIT1002_02158	0.50	-1.8
2,416,078	+		MIT1002_02158	0.51	+1.1
2,416,083	+		MIT1002_02158	0.51	+0.6
2,416,175	+		MIT1002_02158	0.60	-0.7
2,416,175	+		MIT1002_02158	0.60	+1.4
2,416,184	-		MIT1002_02158	0.61	-2.1
2,416,271	+		MIT1002_02158	0.69	+0.4
2,416,307	+		MIT1002_02158	0.72	-0.2
2,416,338	+		MIT1002_02158	0.75	+0.2
2,416,381	+		MIT1002_02158	0.79	-2.7
2,416,381	+		MIT1002_02158	0.79	-1.1
2,416,381	+		MIT1002_02158	0.79	+0.7
2,416,399	-		MIT1002_02158	0.81	-0.8
2,416,578	-				+0.3
2,416,633	+				-0.5
2,416,641	+				+0.7
2,416,668	+				+0.0
2,416,958	-				+0.1
2,416,981	-				+0.6
2,416,985	+				-1.2
2,416,992	+				+1.2
2,417,068	-				+0.0
2,417,068	-				+2.2
2,417,070	+				+0.5
2,417,106	+		MIT1002_02159	0.17	+1.0
2,417,106	+		MIT1002_02159	0.17	-0.1
2,417,107	+		MIT1002_02159	0.17	-0.2
2,417,109	-		MIT1002_02159	0.18	-0.2
2,417,114	-		MIT1002_02159	0.19	-2.2
2,417,119	-		MIT1002_02159	0.20	-0.7
2,417,146	+		MIT1002_02159	0.27	+0.3
2,417,174	+		MIT1002_02159	0.34	+0.6
2,417,189	-		MIT1002_02159	0.38	-2.2
2,417,196	-		MIT1002_02159	0.39	+0.4
2,417,300	+		MIT1002_02159	0.65	+0.5
2,417,308	-		MIT1002_02159	0.67	+0.2
2,417,315	-		MIT1002_02159	0.69	+1.5
2,417,408	-				-0.1
2,417,414	+				-0.6
2,417,419	-				+1.5
2,417,598	+				-1.1
2,417,598	+				+0.3
2,417,598	+				+0.8
2,417,748	+				+0.2
2,417,849	+				+1.4
2,417,849	+				-0.4
2,417,859	-				-2.2
2,417,909	-				+2.3
2,417,916	+				+0.4
2,417,931	-				+0.9
2,417,940	+				-0.1
2,418,091	+				+0.3
2,418,091	+				-1.1
2,418,091	+				+1.2
2,418,268	-				-0.7
2,418,310	+				+0.5
2,418,318	-				+0.5
2,418,342	-				+0.8
2,418,352	-		MIT1002_02162	0.10	+0.9
2,418,412	+		MIT1002_02162	0.17	-1.3
2,418,420	-		MIT1002_02162	0.18	-1.3