Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02037

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
2,287,953	+		MIT1002_02036	0.54	-0.1
2,287,955	+		MIT1002_02036	0.55	+1.5
2,288,041	+		MIT1002_02036	0.59	-0.5
2,288,055	-		MIT1002_02036	0.59	+2.1
2,288,070	+		MIT1002_02036	0.60	+0.1
2,288,096	+		MIT1002_02036	0.61	+1.0
2,288,104	-		MIT1002_02036	0.62	-0.5
2,288,238	+		MIT1002_02036	0.68	-0.6
2,288,246	+		MIT1002_02036	0.68	-0.5
2,288,246	-		MIT1002_02036	0.68	+2.0
2,288,343	+		MIT1002_02036	0.73	-0.5
2,288,345	-		MIT1002_02036	0.73	-2.8
2,288,346	-		MIT1002_02036	0.73	+0.6
2,288,383	+		MIT1002_02036	0.75	-0.2
2,288,402	+		MIT1002_02036	0.76	+1.6
2,288,421	-		MIT1002_02036	0.77	-1.5
2,288,428	-		MIT1002_02036	0.77	+0.0
2,288,472	+		MIT1002_02036	0.79	-1.6
2,288,512	+		MIT1002_02036	0.81	+0.8
2,288,512	+		MIT1002_02036	0.81	+0.5
2,288,604	+		MIT1002_02036	0.85	-0.0
2,288,621	+		MIT1002_02036	0.86	+0.0
2,288,690	+		MIT1002_02036	0.90	-0.6
2,288,696	-		MIT1002_02036	0.90	-1.6
2,288,791	+				+0.1
2,288,887	-				-0.3
2,288,895	-				-2.1
2,288,960	-		MIT1002_02037	0.24	-0.9
2,289,026	-		MIT1002_02037	0.52	+0.5
2,289,026	-		MIT1002_02037	0.52	-1.7
2,289,047	+		MIT1002_02037	0.61	+0.5
2,289,047	+		MIT1002_02037	0.61	-0.2
2,289,047	+		MIT1002_02037	0.61	-0.5
2,289,055	-		MIT1002_02037	0.64	-1.7
2,289,194	-				-0.6
2,289,196	+				+2.1
2,289,205	+				+0.3
2,289,232	+				-1.9
2,289,232	+				-0.7
2,289,232	+				+1.5
2,289,240	-				+0.3
2,289,240	-				+1.0
2,289,240	-				-0.6
2,289,356	-		MIT1002_02038	0.11	-0.3
2,289,356	-		MIT1002_02038	0.11	+0.2
2,289,389	-		MIT1002_02038	0.13	+0.3
2,289,404	-		MIT1002_02038	0.14	+1.1
2,289,410	-		MIT1002_02038	0.14	-1.0
2,289,433	-		MIT1002_02038	0.15	+0.6
2,289,441	+		MIT1002_02038	0.16	-1.0
2,289,526	-		MIT1002_02038	0.20	-0.0
2,289,577	-		MIT1002_02038	0.23	+0.9
2,289,669	+		MIT1002_02038	0.28	+1.8
2,289,770	-		MIT1002_02038	0.33	+0.4
2,289,807	+		MIT1002_02038	0.35	+1.0
2,289,807	+		MIT1002_02038	0.35	-0.1
2,289,833	-		MIT1002_02038	0.36	+1.6
2,289,901	+		MIT1002_02038	0.39	-2.5
2,289,952	+		MIT1002_02038	0.42	+0.6
2,289,993	-		MIT1002_02038	0.44	+0.2
2,290,035	+		MIT1002_02038	0.46	+1.2
2,290,035	+		MIT1002_02038	0.46	+0.1
2,290,035	+		MIT1002_02038	0.46	-1.3
2,290,043	-		MIT1002_02038	0.47	+0.1
2,290,043	-		MIT1002_02038	0.47	-0.1
2,290,043	-		MIT1002_02038	0.47	-0.8
2,290,104	+		MIT1002_02038	0.50	+0.8
2,290,110	+		MIT1002_02038	0.50	-0.3