Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01975

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
2,207,976	+		MIT1002_01974	0.34	-1.0
2,207,976	+		MIT1002_01974	0.34	+0.6
2,207,984	-		MIT1002_01974	0.35	-0.1
2,207,984	-		MIT1002_01974	0.35	-3.2
2,207,984	-		MIT1002_01974	0.35	+0.2
2,207,984	-		MIT1002_01974	0.35	-1.3
2,207,984	-		MIT1002_01974	0.35	+0.6
2,208,025	-		MIT1002_01974	0.39	-0.4
2,208,080	+		MIT1002_01974	0.44	-0.5
2,208,085	-		MIT1002_01974	0.45	+0.1
2,208,093	+		MIT1002_01974	0.46	+0.3
2,208,093	+		MIT1002_01974	0.46	+0.5
2,208,101	-		MIT1002_01974	0.46	-0.7
2,208,101	-		MIT1002_01974	0.46	-2.2
2,208,172	-		MIT1002_01974	0.53	-0.5
2,208,172	-		MIT1002_01974	0.53	+0.3
2,208,172	-		MIT1002_01974	0.53	+0.1
2,208,213	+		MIT1002_01974	0.57	+1.1
2,208,213	+		MIT1002_01974	0.57	+0.5
2,208,213	+		MIT1002_01974	0.57	-0.3
2,208,221	-		MIT1002_01974	0.58	+0.8
2,208,348	+		MIT1002_01974	0.70	-0.9
2,208,348	+		MIT1002_01974	0.70	+0.6
2,208,358	+		MIT1002_01974	0.71	+0.8
2,208,541	+		MIT1002_01974	0.89	-0.7
2,208,644	+				+0.5
2,208,750	+				-1.3
2,208,750	+				-0.7
2,208,750	+				-0.1
2,208,822	+				-0.4
2,208,852	-				+0.7
2,208,910	+		MIT1002_01975	0.16	-0.8
2,208,928	+		MIT1002_01975	0.19	-1.0
2,209,239	+		MIT1002_01975	0.83	+0.9
2,209,262	+		MIT1002_01975	0.88	-0.2
2,209,262	+		MIT1002_01975	0.88	+1.1
2,209,282	+				+0.8
2,209,295	-				-0.3
2,209,295	-				-0.1
2,209,367	-				-0.8
2,209,449	+				-0.1
2,209,473	-				+0.3
2,209,506	-		MIT1002_01976	0.11	+0.6
2,209,522	+		MIT1002_01976	0.13	+0.3
2,209,535	-		MIT1002_01976	0.14	+0.9
2,209,541	+		MIT1002_01976	0.15	+0.3
2,209,542	+		MIT1002_01976	0.15	-0.2
2,209,563	+		MIT1002_01976	0.18	+0.3
2,209,564	-		MIT1002_01976	0.18	-1.5
2,209,602	-		MIT1002_01976	0.22	-1.7
2,209,612	+		MIT1002_01976	0.23	+0.3
2,209,620	-		MIT1002_01976	0.24	+1.1
2,209,624	+		MIT1002_01976	0.25	+1.4
2,209,634	-		MIT1002_01976	0.26	+0.3
2,209,662	+		MIT1002_01976	0.29	-0.1
2,209,665	-		MIT1002_01976	0.29	+0.0
2,209,670	-		MIT1002_01976	0.30	+0.6
2,209,792	+		MIT1002_01976	0.44	-1.2
2,209,797	+		MIT1002_01976	0.44	-0.2
2,209,831	-		MIT1002_01976	0.48	-0.3
2,209,903	-		MIT1002_01976	0.57	+0.1
2,209,911	+		MIT1002_01976	0.57	+1.4
2,209,966	+		MIT1002_01976	0.64	+0.6
2,209,966	+		MIT1002_01976	0.64	-2.2
2,209,966	+		MIT1002_01976	0.64	-1.5
2,209,966	+		MIT1002_01976	0.64	+0.4
2,209,966	+		MIT1002_01976	0.64	+0.7
2,209,966	+		MIT1002_01976	0.64	+1.0
2,209,966	+		MIT1002_01976	0.64	+0.2
2,209,966	+		MIT1002_01976	0.64	+0.0
2,209,974	-		MIT1002_01976	0.65	+0.4
2,209,974	-		MIT1002_01976	0.65	-0.6
2,209,974	-		MIT1002_01976	0.65	-1.0
2,209,974	-		MIT1002_01976	0.65	+3.3
2,209,974	-		MIT1002_01976	0.65	+0.6
2,209,974	-		MIT1002_01976	0.65	-0.2
2,209,974	-		MIT1002_01976	0.65	+0.1
2,209,974	-		MIT1002_01976	0.65	-0.7
2,210,061	-		MIT1002_01976	0.75	+0.7
2,210,140	+		MIT1002_01976	0.84	-0.1
2,210,140	+		MIT1002_01976	0.84	-0.2
2,210,148	-		MIT1002_01976	0.84	-1.0
2,210,148	-		MIT1002_01976	0.84	-2.0
2,210,182	+		MIT1002_01976	0.88	-0.4