Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01802

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
2,006,464	-		MIT1002_01801	0.11	-0.3
2,006,529	-		MIT1002_01801	0.17	+0.2
2,006,559	+		MIT1002_01801	0.20	-0.0
2,006,579	+		MIT1002_01801	0.22	+0.0
2,006,579	-		MIT1002_01801	0.22	+1.1
2,006,581	+		MIT1002_01801	0.22	+0.2
2,006,581	+		MIT1002_01801	0.22	-1.4
2,006,589	-		MIT1002_01801	0.23	+0.9
2,006,589	-		MIT1002_01801	0.23	+1.0
2,006,748	-		MIT1002_01801	0.37	+0.0
2,006,763	+		MIT1002_01801	0.38	+1.1
2,006,771	-		MIT1002_01801	0.39	+0.1
2,006,819	-		MIT1002_01801	0.43	+0.9
2,006,870	+		MIT1002_01801	0.48	+0.7
2,006,880	+		MIT1002_01801	0.49	-0.6
2,006,889	+		MIT1002_01801	0.50	+0.7
2,006,889	+		MIT1002_01801	0.50	-1.1
2,006,903	-		MIT1002_01801	0.51	+1.2
2,007,020	+		MIT1002_01801	0.62	+1.1
2,007,080	-		MIT1002_01801	0.67	+0.4
2,007,159	+		MIT1002_01801	0.74	+0.1
2,007,178	-		MIT1002_01801	0.76	-0.1
2,007,207	-		MIT1002_01801	0.79	-0.5
2,007,247	+		MIT1002_01801	0.82	-0.2
2,007,257	+		MIT1002_01801	0.83	+0.7
2,007,296	+		MIT1002_01801	0.87	+0.3
2,007,299	-		MIT1002_01801	0.87	-0.9
2,007,327	+		MIT1002_01801	0.90	-2.1
2,007,337	+				-0.1
2,007,481	-				+0.7
2,007,485	+				-1.2
2,007,742	-		MIT1002_01802	0.21	-3.1
2,007,830	+		MIT1002_01802	0.27	+0.4
2,007,837	+		MIT1002_01802	0.28	+2.2
2,007,860	-		MIT1002_01802	0.29	+1.4
2,007,898	-		MIT1002_01802	0.32	+0.1
2,007,902	+		MIT1002_01802	0.32	-0.0
2,008,145	+		MIT1002_01802	0.49	-1.5
2,008,205	-		MIT1002_01802	0.53	+1.6
2,008,210	-		MIT1002_01802	0.53	+1.2
2,008,226	+		MIT1002_01802	0.55	-0.7
2,008,282	+		MIT1002_01802	0.58	-0.1
2,008,431	+		MIT1002_01802	0.69	+0.2
2,008,495	+		MIT1002_01802	0.73	+2.0
2,008,527	-		MIT1002_01802	0.75	-0.0
2,008,583	+		MIT1002_01802	0.79	+1.6
2,008,604	+		MIT1002_01802	0.81	-1.4
2,008,612	-		MIT1002_01802	0.81	+0.6
2,008,677	-		MIT1002_01802	0.86	-0.2
2,008,678	-		MIT1002_01802	0.86	+1.5
2,008,721	+		MIT1002_01802	0.89	-1.4
2,008,723	+		MIT1002_01802	0.89	-0.7
2,008,736	-				+0.5
2,008,772	-				+0.3
2,008,784	+				+0.1
2,008,784	+				-2.4
2,008,792	-				-0.7
2,008,792	-				-0.7
2,008,844	+				+0.2
2,008,852	-				+0.7
2,008,852	-				+0.6
2,008,852	-				+0.1
2,008,919	-				-1.4
2,009,106	+		MIT1002_01803	0.33	-0.4
2,009,114	-		MIT1002_01803	0.35	+0.3
2,009,115	-		MIT1002_01803	0.35	-0.2
2,009,128	+		MIT1002_01803	0.37	+1.4
2,009,128	+		MIT1002_01803	0.37	-1.8
2,009,128	+		MIT1002_01803	0.37	+0.0
2,009,136	-		MIT1002_01803	0.38	-0.4
2,009,149	-		MIT1002_01803	0.40	-0.3
2,009,235	-		MIT1002_01803	0.52	-0.5
2,009,273	-		MIT1002_01803	0.58	+0.8
2,009,383	+		MIT1002_01803	0.74	-0.9
2,009,383	+		MIT1002_01803	0.74	-1.6
2,009,391	-		MIT1002_01803	0.75	+0.1
2,009,391	-		MIT1002_01803	0.75	-0.0
2,009,392	+		MIT1002_01803	0.75	-1.9
2,009,399	+		MIT1002_01803	0.76	+1.0
2,009,399	+		MIT1002_01803	0.76	-0.7
2,009,407	-		MIT1002_01803	0.77	+0.8
2,009,470	-		MIT1002_01803	0.87	+0.4
2,009,531	+				+0.2
2,009,539	-				-0.0
2,009,539	-				+1.0
2,009,561	-				-1.7
2,009,619	-				+1.1
2,009,625	-				-0.8