Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01664

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
1,837,336	-		MIT1002_01663	0.14	-0.5
1,837,384	+		MIT1002_01663	0.18	-1.3
1,837,392	-		MIT1002_01663	0.19	-1.2
1,837,392	-		MIT1002_01663	0.19	-0.1
1,837,618	-		MIT1002_01663	0.39	+0.3
1,837,725	-		MIT1002_01663	0.48	+0.8
1,837,754	-		MIT1002_01663	0.50	-0.3
1,837,756	+		MIT1002_01663	0.51	-1.9
1,837,768	+		MIT1002_01663	0.52	+1.1
1,837,768	+		MIT1002_01663	0.52	+0.4
1,837,846	-		MIT1002_01663	0.58	+1.4
1,837,926	+		MIT1002_01663	0.65	-0.5
1,838,027	+		MIT1002_01663	0.74	+0.4
1,838,061	+		MIT1002_01663	0.77	+0.5
1,838,069	-		MIT1002_01663	0.78	-0.6
1,838,069	-		MIT1002_01663	0.78	+0.3
1,838,090	-		MIT1002_01663	0.79	+1.4
1,838,092	+		MIT1002_01663	0.80	+0.5
1,838,130	+		MIT1002_01663	0.83	+0.6
1,838,218	+				+1.2
1,838,228	+				+0.1
1,838,236	-				-1.2
1,838,236	-				+0.2
1,838,248	-				+0.1
1,838,308	-				+0.8
1,838,407	-				+0.2
1,838,409	+				+0.5
1,838,409	+				+1.5
1,838,485	+		MIT1002_01664	0.16	+0.4
1,838,572	+		MIT1002_01664	0.24	+0.8
1,838,757	-		MIT1002_01664	0.43	+0.0
1,838,879	-		MIT1002_01664	0.56	-0.4
1,838,900	+		MIT1002_01664	0.58	+1.8
1,838,922	-		MIT1002_01664	0.60	+0.8
1,839,051	+		MIT1002_01664	0.73	-0.2
1,839,075	-		MIT1002_01664	0.76	+0.1
1,839,104	+		MIT1002_01664	0.79	+1.6
1,839,367	+				-0.2
1,839,422	-				-0.1
1,839,593	+				-2.0
1,839,593	+				-0.3
1,839,593	+				-0.5
1,839,594	+				+0.1
1,839,601	-				+0.1
1,839,601	-				+0.4
1,839,601	-				+0.4
1,839,602	-				-2.2
1,839,619	-				-1.2
1,839,686	-				-0.5
1,839,726	+		MIT1002_01665	0.10	-1.2
1,839,759	+		MIT1002_01665	0.14	+1.0
1,839,812	-		MIT1002_01665	0.20	-2.2
1,839,818	+		MIT1002_01665	0.21	-1.8
1,839,825	-		MIT1002_01665	0.21	-0.3
1,839,838	+		MIT1002_01665	0.23	+0.1
1,839,861	+		MIT1002_01665	0.25	-2.0
1,839,880	-		MIT1002_01665	0.28	-1.6
1,839,965	+		MIT1002_01665	0.37	+0.8
1,840,007	+		MIT1002_01665	0.42	-0.2
1,840,037	+		MIT1002_01665	0.45	-0.5
1,840,052	+		MIT1002_01665	0.47	-1.0
1,840,055	-		MIT1002_01665	0.47	-1.5
1,840,092	+		MIT1002_01665	0.51	-2.1
1,840,154	-		MIT1002_01665	0.58	-0.7
1,840,225	+		MIT1002_01665	0.66	-1.4
1,840,225	+		MIT1002_01665	0.66	-1.3
1,840,225	+		MIT1002_01665	0.66	-1.8
1,840,233	-		MIT1002_01665	0.67	-0.4
1,840,235	-		MIT1002_01665	0.67	-3.6
1,840,276	+		MIT1002_01665	0.72	-2.1
1,840,276	+		MIT1002_01665	0.72	-2.1
1,840,283	-		MIT1002_01665	0.72	-0.3
1,840,284	-		MIT1002_01665	0.73	-0.7