Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01557

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
1,709,308	-		MIT1002_01556	0.29	-0.0
1,709,328	+		MIT1002_01556	0.30	+0.6
1,709,381	+		MIT1002_01556	0.35	+0.1
1,709,494	-		MIT1002_01556	0.46	-0.8
1,709,494	-		MIT1002_01556	0.46	-0.1
1,709,494	-		MIT1002_01556	0.46	-0.9
1,709,597	-		MIT1002_01556	0.55	-0.5
1,709,609	-		MIT1002_01556	0.56	-0.1
1,709,668	-		MIT1002_01556	0.62	+0.9
1,709,727	-		MIT1002_01556	0.67	-0.4
1,709,754	+		MIT1002_01556	0.70	+0.4
1,709,757	-		MIT1002_01556	0.70	-0.1
1,709,760	+		MIT1002_01556	0.70	-2.8
1,709,766	+		MIT1002_01556	0.71	-0.4
1,709,817	+		MIT1002_01556	0.76	-0.2
1,709,817	+		MIT1002_01556	0.76	-1.2
1,709,817	+		MIT1002_01556	0.76	+0.6
1,709,825	-		MIT1002_01556	0.77	-2.6
1,709,825	-		MIT1002_01556	0.77	-0.6
1,709,851	+		MIT1002_01556	0.79	-0.2
1,709,942	-		MIT1002_01556	0.87	-1.2
1,710,008	-				-1.8
1,710,034	+				-0.2
1,710,048	+				-0.3
1,710,056	-				+2.1
1,710,159	+				+1.4
1,710,209	+				+0.4
1,710,352	+				+1.1
1,710,364	+				-0.4
1,710,372	-				+1.8
1,710,488	+				+1.6
1,710,488	+				+1.2
1,710,510	-				+0.1
1,710,609	+				-0.1
1,710,614	+				+0.9
1,710,616	+				-1.2
1,710,616	+				-2.3
1,710,622	-				+0.2
1,710,623	-				+0.4
1,710,681	-				-3.0
1,710,690	+		MIT1002_01558	0.10	+1.4
1,710,691	-		MIT1002_01558	0.11	+0.4
1,710,771	+		MIT1002_01558	0.15	+0.1
1,710,790	-		MIT1002_01558	0.16	-2.0
1,710,837	-		MIT1002_01558	0.19	-1.8
1,710,868	+		MIT1002_01558	0.21	-0.7
1,710,917	+		MIT1002_01558	0.24	-2.5
1,711,093	+		MIT1002_01558	0.34	-1.0
1,711,101	-		MIT1002_01558	0.34	+0.4
1,711,139	-		MIT1002_01558	0.37	-0.2
1,711,161	-		MIT1002_01558	0.38	-1.2
1,711,166	+		MIT1002_01558	0.38	+0.0
1,711,267	+		MIT1002_01558	0.44	-0.3
1,711,267	+		MIT1002_01558	0.44	-1.4
1,711,279	+		MIT1002_01558	0.45	-1.0
1,711,285	-		MIT1002_01558	0.45	+0.8