Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01238

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
1,363,562	+				-1.5
1,363,570	-				-0.5
1,363,580	-				-3.1
1,363,625	+				-0.7
1,363,722	+				-1.1
1,364,038	+		MIT1002_01237	0.22	+0.4
1,364,046	-		MIT1002_01237	0.23	-0.4
1,364,046	-		MIT1002_01237	0.23	-0.6
1,364,046	-		MIT1002_01237	0.23	-3.2
1,364,046	-		MIT1002_01237	0.23	-0.5
1,364,098	+		MIT1002_01237	0.31	-1.8
1,364,144	+		MIT1002_01237	0.39	-0.5
1,364,144	+		MIT1002_01237	0.39	+0.9
1,364,144	+		MIT1002_01237	0.39	-1.2
1,364,144	+		MIT1002_01237	0.39	-1.0
1,364,144	+		MIT1002_01237	0.39	-2.4
1,364,144	+		MIT1002_01237	0.39	-2.4
1,364,144	+		MIT1002_01237	0.39	-0.9
1,364,152	-		MIT1002_01237	0.40	-1.5
1,364,152	-		MIT1002_01237	0.40	-2.6
1,364,152	-		MIT1002_01237	0.40	+0.5
1,364,152	-		MIT1002_01237	0.40	-1.6
1,364,152	-		MIT1002_01237	0.40	-1.8
1,364,152	-		MIT1002_01237	0.40	-2.2
1,364,152	-		MIT1002_01237	0.40	+0.5
1,364,155	+		MIT1002_01237	0.40	-1.1
1,364,210	+		MIT1002_01237	0.49	+0.1
1,364,219	+		MIT1002_01237	0.51	-1.7
1,364,403	-		MIT1002_01237	0.80	-1.0
1,364,418	-		MIT1002_01237	0.82	-1.5
1,364,433	+		MIT1002_01237	0.84	-1.2
1,364,441	+		MIT1002_01237	0.86	-0.7
1,364,461	-		MIT1002_01237	0.89	-1.1
1,364,468	+				-1.1
1,364,479	+				+0.3
1,364,484	-				+0.5
1,364,513	+				-1.5
1,364,591	+				+4.6
1,364,619	-				+4.2
1,364,660	+		MIT1002_01238	0.12	+3.5
1,364,670	+		MIT1002_01238	0.13	+4.2
1,364,677	+		MIT1002_01238	0.14	+3.2
1,364,685	-		MIT1002_01238	0.14	+4.3
1,364,748	+		MIT1002_01238	0.20	+3.8
1,364,805	-		MIT1002_01238	0.26	+3.6
1,364,851	-		MIT1002_01238	0.30	+3.6
1,364,951	+		MIT1002_01238	0.40	+4.0
1,364,951	+		MIT1002_01238	0.40	+3.7
1,364,951	+		MIT1002_01238	0.40	+4.6
1,364,959	-		MIT1002_01238	0.40	+4.0
1,365,040	-		MIT1002_01238	0.48	+4.0
1,365,090	+		MIT1002_01238	0.53	-1.4
1,365,195	+		MIT1002_01238	0.63	-3.7
1,365,203	-		MIT1002_01238	0.63	+3.3
1,365,235	-		MIT1002_01238	0.66	+1.1
1,365,286	+		MIT1002_01238	0.71	+2.6
1,365,306	-		MIT1002_01238	0.73	+3.7
1,365,377	-		MIT1002_01238	0.80	+2.6
1,365,414	+		MIT1002_01238	0.83	-0.1
1,365,416	+		MIT1002_01238	0.84	+2.7
1,365,422	-		MIT1002_01238	0.84	+2.9
1,365,422	-		MIT1002_01238	0.84	+3.2
1,365,422	-		MIT1002_01238	0.84	+3.5
1,365,441	+		MIT1002_01238	0.86	-0.4
1,365,449	-		MIT1002_01238	0.87	+3.8
1,365,476	+		MIT1002_01238	0.89	+2.9
1,365,476	+		MIT1002_01238	0.89	+1.2
1,365,484	-				+1.6
1,365,522	-				-0.3
1,365,522	-				-1.9
1,365,524	+				+4.1
1,365,567	+				-0.6
1,365,756	-				+0.6
1,365,756	-				-1.5
1,365,766	-				-0.6
1,365,820	+				-1.4
1,365,885	+				-1.7
1,365,885	+				+0.5
1,365,898	-				-0.6
1,365,902	+				-0.9
1,365,975	+				-1.7
1,365,975	+				-4.2
1,366,061	+				-0.7
1,366,113	-		MIT1002_01239	0.11	-3.1
1,366,131	-		MIT1002_01239	0.12	-1.3
1,366,270	+		MIT1002_01239	0.16	-1.5
1,366,278	-		MIT1002_01239	0.17	-1.6
1,366,312	-		MIT1002_01239	0.18	-1.2
1,366,348	+		MIT1002_01239	0.19	-0.4
1,366,428	+		MIT1002_01239	0.22	-1.2
1,366,428	+		MIT1002_01239	0.22	-3.4
1,366,428	+		MIT1002_01239	0.22	-1.0
1,366,428	+		MIT1002_01239	0.22	-1.5
1,366,428	+		MIT1002_01239	0.22	-2.4
1,366,428	+		MIT1002_01239	0.22	-1.7
1,366,428	+		MIT1002_01239	0.22	-1.3
1,366,436	-		MIT1002_01239	0.22	-1.3
1,366,518	-		MIT1002_01239	0.25	-1.1