Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01214

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
1,336,588	+		MIT1002_01213	0.37	+1.5
1,336,613	+		MIT1002_01213	0.39	+0.6
1,336,613	+		MIT1002_01213	0.39	-1.8
1,336,613	+		MIT1002_01213	0.39	-0.6
1,336,621	-		MIT1002_01213	0.40	+0.3
1,336,804	-		MIT1002_01213	0.57	+2.0
1,336,834	-		MIT1002_01213	0.60	-0.2
1,336,842	-		MIT1002_01213	0.60	+1.5
1,336,859	+		MIT1002_01213	0.62	-1.5
1,336,874	-		MIT1002_01213	0.63	+0.2
1,337,006	-		MIT1002_01213	0.75	+0.8
1,337,006	-		MIT1002_01213	0.75	-0.2
1,337,068	-		MIT1002_01213	0.81	-0.9
1,337,111	+		MIT1002_01213	0.85	+1.5
1,337,165	+				-1.4
1,337,173	-				-0.8
1,337,187	+				-1.4
1,337,242	+				-0.1
1,337,242	+				-0.6
1,337,242	+				+0.7
1,337,242	+				+1.0
1,337,242	+				+2.1
1,337,242	+				-1.4
1,337,242	+				-0.3
1,337,242	+				-1.1
1,337,242	+				+0.3
1,337,250	-				+1.6
1,337,250	-				-1.8
1,337,250	-				+0.4
1,337,250	-				-0.2
1,337,250	-				-0.3
1,337,364	+				+0.5
1,337,444	-				-2.0
1,337,444	-				+0.8
1,337,446	-				+0.8
1,337,446	-				-1.3
1,337,483	+				+0.2
1,337,502	+				-0.5
1,337,601	+		MIT1002_01214	0.47	-0.2
1,337,644	+		MIT1002_01214	0.66	-0.7
1,337,751	+				+1.7
1,337,751	+				-1.2
1,337,790	-				+0.6
1,337,797	+				-1.5
1,337,797	+				-0.0
1,337,797	+				-0.6
1,337,805	-				-1.9
1,337,837	+				+0.4
1,337,837	+				+0.6
1,337,837	+				+0.8
1,337,837	+				-0.2
1,337,837	+				+0.0
1,337,837	+				+1.4
1,337,845	-				-0.6
1,337,845	-				-2.3
1,337,845	-				+0.3
1,337,845	-				+0.3
1,337,845	-				-0.4
1,337,845	-				+0.5
1,337,845	-				+0.9
1,337,845	-				+0.7
1,337,859	-				-0.2
1,337,870	+				+0.1
1,337,904	-				+3.7