Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01206

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
1,328,522	+		MIT1002_01204	0.68	+0.9
1,328,665	+		MIT1002_01204	0.84	+0.9
1,328,670	+		MIT1002_01204	0.85	+0.3
1,328,706	+		MIT1002_01204	0.89	-0.3
1,328,706	+		MIT1002_01204	0.89	+0.6
1,328,706	+		MIT1002_01204	0.89	+0.4
1,328,712	-		MIT1002_01204	0.90	+1.1
1,328,713	+		MIT1002_01204	0.90	+0.1
1,328,807	-				+1.0
1,328,845	-				-0.3
1,328,845	-				+0.8
1,328,855	-				+1.3
1,328,855	-				+0.1
1,328,956	+				-1.8
1,328,988	+				-0.3
1,328,988	+				+1.5
1,328,988	+				+1.0
1,329,072	+				+2.0
1,329,107	+		MIT1002_01205	0.12	+1.5
1,329,113	-		MIT1002_01205	0.14	+0.8
1,329,117	+		MIT1002_01205	0.14	+1.0
1,329,204	+		MIT1002_01205	0.33	-0.6
1,329,241	-		MIT1002_01205	0.41	-1.2
1,329,270	-		MIT1002_01205	0.48	-0.2
1,329,321	-		MIT1002_01205	0.59	+0.1
1,329,398	+		MIT1002_01205	0.76	+0.7
1,329,406	-		MIT1002_01205	0.77	+0.5
1,329,406	-		MIT1002_01205	0.77	-0.4
1,329,460	+		MIT1002_01205	0.89	+1.2
1,329,468	+				-0.9
1,329,478	+				+0.2
1,329,539	+				-0.5
1,329,550	+				+0.0
1,329,593	-				-2.3
1,329,663	-		MIT1002_01206	0.15	+0.1
1,329,781	+		MIT1002_01206	0.26	+0.1
1,329,781	+		MIT1002_01206	0.26	-0.2
1,329,781	+		MIT1002_01206	0.26	+0.8
1,329,817	-		MIT1002_01206	0.30	+0.1
1,329,819	+		MIT1002_01206	0.30	+1.2
1,329,859	+		MIT1002_01206	0.34	+1.2
1,330,043	+		MIT1002_01206	0.51	+1.3
1,330,043	+		MIT1002_01206	0.51	-0.8
1,330,051	-		MIT1002_01206	0.52	+0.2
1,330,080	-		MIT1002_01206	0.55	+1.3
1,330,127	+		MIT1002_01206	0.59	+1.4
1,330,174	-		MIT1002_01206	0.63	-0.2
1,330,262	+		MIT1002_01206	0.72	-0.5
1,330,275	+		MIT1002_01206	0.73	-2.3
1,330,358	+		MIT1002_01206	0.81	-1.3
1,330,358	+		MIT1002_01206	0.81	+1.0
1,330,366	-		MIT1002_01206	0.82	+0.1
1,330,371	-		MIT1002_01206	0.82	-0.8
1,330,435	+		MIT1002_01206	0.88	+1.5
1,330,445	+		MIT1002_01206	0.89	+1.0
1,330,453	-				+0.4
1,330,461	-				+0.7
1,330,469	-				-0.1
1,330,475	+				+2.2
1,330,481	+				+0.5
1,330,481	+				+0.4
1,330,522	-				+0.4
1,330,558	+				-1.1
1,330,639	-				+0.6
1,330,703	+		MIT1002_01207	0.17	+0.9
1,330,734	-		MIT1002_01207	0.25	-0.6
1,330,960	+		MIT1002_01207	0.84	+0.0
1,330,982	-		MIT1002_01207	0.89	+0.2
1,330,988	+				+0.4
1,331,037	+				-0.2
1,331,141	-				-1.3
1,331,164	+				-0.1
1,331,225	-				-0.8
1,331,298	-				+0.2
1,331,306	-				+0.6
1,331,306	-				+2.2
1,331,327	-				-0.2
1,331,341	+				-0.2
1,331,349	-		MIT1002_01208	0.11	-0.5
1,331,428	+		MIT1002_01208	0.19	-0.1
1,331,428	+		MIT1002_01208	0.19	+0.3
1,331,428	+		MIT1002_01208	0.19	-0.4
1,331,436	-		MIT1002_01208	0.20	+0.0
1,331,451	+		MIT1002_01208	0.22	-0.8
1,331,482	+		MIT1002_01208	0.25	-0.1
1,331,491	+		MIT1002_01208	0.26	+0.4
1,331,491	+		MIT1002_01208	0.26	+0.1
1,331,499	-		MIT1002_01208	0.27	-0.9
1,331,499	-		MIT1002_01208	0.27	+1.1
1,331,541	-		MIT1002_01208	0.32	+0.0
1,331,546	-		MIT1002_01208	0.32	+1.6
1,331,551	-		MIT1002_01208	0.33	-2.0
1,331,556	-		MIT1002_01208	0.33	-0.3