Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01189

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
1,300,753	-		MIT1002_01187	0.72	-0.1
1,300,763	+		MIT1002_01187	0.73	+0.3
1,300,936	+		MIT1002_01187	0.89	+0.3
1,300,963	-				+0.5
1,301,105	+		MIT1002_01188	0.11	+0.1
1,301,113	-		MIT1002_01188	0.13	+0.8
1,301,113	-		MIT1002_01188	0.13	+0.0
1,301,127	-		MIT1002_01188	0.16	-0.8
1,301,206	-		MIT1002_01188	0.34	+0.1
1,301,346	-		MIT1002_01188	0.64	+1.2
1,301,353	+		MIT1002_01188	0.66	+0.2
1,301,353	+		MIT1002_01188	0.66	-0.0
1,301,353	+		MIT1002_01188	0.66	+1.2
1,301,400	+		MIT1002_01188	0.76	-1.9
1,301,406	+		MIT1002_01188	0.77	+0.6
1,301,407	+		MIT1002_01188	0.78	-2.1
1,301,408	-		MIT1002_01188	0.78	+1.3
1,301,454	-		MIT1002_01188	0.88	-2.6
1,301,486	+				+0.0
1,301,493	-				-0.1
1,301,627	-				-1.1
1,301,689	+				+1.5
1,301,772	+				+0.7
1,301,873	-		MIT1002_01189	0.20	+0.2
1,302,050	-		MIT1002_01189	0.44	+1.3
1,302,139	+		MIT1002_01189	0.56	+0.5
1,302,139	+		MIT1002_01189	0.56	-1.3
1,302,147	-		MIT1002_01189	0.57	-0.5
1,302,147	-		MIT1002_01189	0.57	-3.6
1,302,147	-		MIT1002_01189	0.57	-0.1
1,302,176	+		MIT1002_01189	0.61	+0.3
1,302,199	+		MIT1002_01189	0.64	+0.2
1,302,199	-		MIT1002_01189	0.64	+0.6
1,302,204	+		MIT1002_01189	0.65	+1.5
1,302,204	+		MIT1002_01189	0.65	+0.6
1,302,204	+		MIT1002_01189	0.65	-0.1
1,302,214	+		MIT1002_01189	0.66	-0.2
1,302,214	+		MIT1002_01189	0.66	+0.1
1,302,214	+		MIT1002_01189	0.66	-1.6
1,302,220	-		MIT1002_01189	0.67	+1.1
1,302,222	-		MIT1002_01189	0.67	+0.1
1,302,222	-		MIT1002_01189	0.67	+1.0
1,302,236	-		MIT1002_01189	0.69	+0.1
1,302,238	+		MIT1002_01189	0.70	-0.9
1,302,252	+		MIT1002_01189	0.72	+0.5
1,302,301	+		MIT1002_01189	0.78	-0.3
1,302,329	+		MIT1002_01189	0.82	-1.3
1,302,337	-		MIT1002_01189	0.83	+1.8
1,302,337	-		MIT1002_01189	0.83	-1.3
1,302,357	+		MIT1002_01189	0.86	-0.7
1,302,359	-		MIT1002_01189	0.86	-0.2
1,302,395	+				+0.7
1,302,406	-				-0.4
1,302,406	-				+0.2
1,302,528	-				+0.4
1,302,528	-				-1.2
1,302,539	+				-0.3
1,302,571	-				+0.0
1,302,596	+				-0.5
1,302,596	+				-0.2
1,302,604	-				-0.9
1,302,604	-				+0.8
1,302,604	-				+0.6
1,302,629	+				+2.3
1,302,637	-		MIT1002_01190	0.10	+1.3
1,302,673	+		MIT1002_01190	0.13	-1.9
1,302,675	+		MIT1002_01190	0.13	+1.8
1,302,675	+		MIT1002_01190	0.13	+0.0
1,302,681	-		MIT1002_01190	0.13	-0.1
1,302,807	-		MIT1002_01190	0.20	-0.1
1,302,810	+		MIT1002_01190	0.21	+0.6
1,302,826	-		MIT1002_01190	0.22	+0.8
1,302,869	-		MIT1002_01190	0.24	-0.8
1,302,869	-		MIT1002_01190	0.24	+1.2
1,302,869	-		MIT1002_01190	0.24	+0.7
1,302,941	+		MIT1002_01190	0.28	+0.3
1,303,023	+		MIT1002_01190	0.33	+0.4
1,303,023	+		MIT1002_01190	0.33	-0.4
1,303,023	+		MIT1002_01190	0.33	+0.9
1,303,134	+		MIT1002_01190	0.40	+0.4
1,303,183	+		MIT1002_01190	0.43	+1.8
1,303,183	+		MIT1002_01190	0.43	+0.8
1,303,183	+		MIT1002_01190	0.43	-1.7
1,303,183	+		MIT1002_01190	0.43	+0.2
1,303,191	-		MIT1002_01190	0.43	-0.6
1,303,191	-		MIT1002_01190	0.43	+0.7
1,303,199	-		MIT1002_01190	0.44	+0.8
1,303,231	+		MIT1002_01190	0.46	-1.1
1,303,239	-		MIT1002_01190	0.46	+0.5
1,303,239	-		MIT1002_01190	0.46	-1.3
1,303,270	+		MIT1002_01190	0.48	+1.6
1,303,278	-		MIT1002_01190	0.48	+0.4
1,303,297	+		MIT1002_01190	0.49	+0.2
1,303,324	+		MIT1002_01190	0.51	-1.4