Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01187

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
1,298,987	+				-0.2
1,298,995	-				+0.9
1,299,003	+				+0.3
1,299,013	+				+0.3
1,299,013	+				-0.4
1,299,021	-				+0.1
1,299,021	-				+0.9
1,299,076	+		MIT1002_01186	0.13	+0.6
1,299,196	+		MIT1002_01186	0.25	+0.3
1,299,197	+		MIT1002_01186	0.25	+0.5
1,299,220	+		MIT1002_01186	0.27	-0.8
1,299,264	-		MIT1002_01186	0.31	+0.0
1,299,269	-		MIT1002_01186	0.32	+0.2
1,299,275	-		MIT1002_01186	0.32	+0.3
1,299,315	-		MIT1002_01186	0.36	-0.1
1,299,473	+		MIT1002_01186	0.51	-0.4
1,299,473	+		MIT1002_01186	0.51	+0.1
1,299,481	-		MIT1002_01186	0.52	-1.3
1,299,481	-		MIT1002_01186	0.52	-0.5
1,299,481	-		MIT1002_01186	0.52	+0.2
1,299,815	+		MIT1002_01186	0.85	+0.4
1,299,908	-				-1.4
1,299,913	-				-0.8
1,299,913	-				-2.6
1,300,003	-				-0.2
1,300,011	-				+0.2
1,300,050	-				-0.1
1,300,137	+		MIT1002_01187	0.14	-0.4
1,300,137	+		MIT1002_01187	0.14	+0.3
1,300,137	+		MIT1002_01187	0.14	-2.4
1,300,155	-		MIT1002_01187	0.16	+0.5
1,300,160	-		MIT1002_01187	0.16	+0.2
1,300,217	+		MIT1002_01187	0.22	-0.0
1,300,217	+		MIT1002_01187	0.22	-1.2
1,300,225	-		MIT1002_01187	0.23	-0.6
1,300,225	-		MIT1002_01187	0.23	-0.5
1,300,225	-		MIT1002_01187	0.23	-1.6
1,300,371	-		MIT1002_01187	0.36	-0.3
1,300,392	+		MIT1002_01187	0.38	-1.8
1,300,400	+		MIT1002_01187	0.39	+0.1
1,300,418	-		MIT1002_01187	0.41	+0.1
1,300,464	+		MIT1002_01187	0.45	-0.1
1,300,466	+		MIT1002_01187	0.45	+0.4
1,300,466	+		MIT1002_01187	0.45	+0.5
1,300,474	-		MIT1002_01187	0.46	-0.5
1,300,474	-		MIT1002_01187	0.46	+1.1
1,300,474	-		MIT1002_01187	0.46	+0.8
1,300,474	-		MIT1002_01187	0.46	-0.9
1,300,474	-		MIT1002_01187	0.46	-2.7
1,300,474	-		MIT1002_01187	0.46	-1.4
1,300,562	+		MIT1002_01187	0.54	+0.8
1,300,630	-		MIT1002_01187	0.60	+0.3
1,300,651	-		MIT1002_01187	0.62	-0.9
1,300,753	-		MIT1002_01187	0.72	-0.1
1,300,763	+		MIT1002_01187	0.73	+0.3
1,300,936	+		MIT1002_01187	0.89	+0.3
1,300,963	-				+0.5
1,301,105	+		MIT1002_01188	0.11	+0.1
1,301,113	-		MIT1002_01188	0.13	+0.8
1,301,113	-		MIT1002_01188	0.13	+0.0
1,301,127	-		MIT1002_01188	0.16	-0.8
1,301,206	-		MIT1002_01188	0.34	+0.1
1,301,346	-		MIT1002_01188	0.64	+1.2
1,301,353	+		MIT1002_01188	0.66	+0.2
1,301,353	+		MIT1002_01188	0.66	-0.0
1,301,353	+		MIT1002_01188	0.66	+1.2
1,301,400	+		MIT1002_01188	0.76	-1.9
1,301,406	+		MIT1002_01188	0.77	+0.6
1,301,407	+		MIT1002_01188	0.78	-2.1
1,301,408	-		MIT1002_01188	0.78	+1.3
1,301,454	-		MIT1002_01188	0.88	-2.6
1,301,486	+				+0.0
1,301,493	-				-0.1
1,301,627	-				-1.1
1,301,689	+				+1.5
1,301,772	+				+0.7
1,301,873	-		MIT1002_01189	0.20	+0.2
1,302,050	-		MIT1002_01189	0.44	+1.3