Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01145

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
1,256,156	-		MIT1002_01143	0.18	-3.6
1,256,232	+		MIT1002_01143	0.29	-2.2
1,256,343	-		MIT1002_01143	0.45	-3.6
1,256,343	-		MIT1002_01143	0.45	-4.2
1,256,414	-		MIT1002_01143	0.55	-3.9
1,256,474	+		MIT1002_01143	0.64	+0.1
1,256,502	+		MIT1002_01143	0.68	-0.8
1,256,510	-		MIT1002_01143	0.69	-3.5
1,256,577	+		MIT1002_01143	0.79	-2.4
1,256,655	-				-1.8
1,256,727	+				+0.0
1,256,744	-				+0.8
1,256,744	-				-0.5
1,256,830	+		MIT1002_01144	0.15	-0.5
1,256,862	-		MIT1002_01144	0.28	-4.2
1,256,869	+		MIT1002_01144	0.31	+1.9
1,256,882	-		MIT1002_01144	0.37	-0.0
1,256,920	-		MIT1002_01144	0.53	-1.0
1,256,922	+		MIT1002_01144	0.53	+1.3
1,256,981	-		MIT1002_01144	0.78	+0.0
1,256,992	+		MIT1002_01144	0.82	+0.3
1,257,000	-		MIT1002_01144	0.86	+0.1
1,257,018	+				-1.4
1,257,018	-				+1.2
1,257,158	-		MIT1002_01145	0.29	-0.4
1,257,178	+		MIT1002_01145	0.33	+0.5
1,257,198	+		MIT1002_01145	0.38	+0.4
1,257,267	+		MIT1002_01145	0.53	-0.7
1,257,307	-		MIT1002_01145	0.62	+0.4
1,257,424	+		MIT1002_01145	0.88	-1.0
1,257,491	-				-0.3
1,257,511	-				+0.2
1,257,598	+				-0.8
1,257,604	+				+0.9
1,257,604	+				+0.9
1,257,604	+				-0.4
1,257,612	-				-0.8
1,257,762	+		MIT1002_01146	0.10	-2.8
1,257,828	+		MIT1002_01146	0.18	-2.2
1,257,828	+		MIT1002_01146	0.18	+2.3
1,257,828	+		MIT1002_01146	0.18	-1.8
1,257,917	+		MIT1002_01146	0.30	+0.2
1,257,923	-		MIT1002_01146	0.30	-1.7
1,257,923	-		MIT1002_01146	0.30	-1.9
1,258,197	-		MIT1002_01146	0.65	-3.4
1,258,228	+		MIT1002_01146	0.68	-0.0
1,258,228	+		MIT1002_01146	0.68	-0.6
1,258,228	+		MIT1002_01146	0.68	-1.2
1,258,277	+		MIT1002_01146	0.75	+0.4
1,258,277	+		MIT1002_01146	0.75	-0.1
1,258,277	+		MIT1002_01146	0.75	-0.2
1,258,285	-		MIT1002_01146	0.76	+0.7
1,258,340	-		MIT1002_01146	0.82	-1.5