Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00928

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 4
1,029,681	+		MIT1002_00927	0.30	+1.0
1,029,878	-		MIT1002_00927	0.47	+0.3
1,029,934	+		MIT1002_00927	0.52	+0.1
1,029,942	-		MIT1002_00927	0.53	+0.6
1,029,952	-		MIT1002_00927	0.54	-0.9
1,030,015	-		MIT1002_00927	0.59	-0.1
1,030,065	+		MIT1002_00927	0.64	+0.3
1,030,065	+		MIT1002_00927	0.64	+1.5
1,030,073	-		MIT1002_00927	0.64	+0.7
1,030,073	-		MIT1002_00927	0.64	-0.4
1,030,073	-		MIT1002_00927	0.64	+1.4
1,030,073	-		MIT1002_00927	0.64	+0.0
1,030,092	-		MIT1002_00927	0.66	+0.8
1,030,113	+		MIT1002_00927	0.68	-1.0
1,030,121	-		MIT1002_00927	0.69	-0.1
1,030,129	+		MIT1002_00927	0.69	+1.0
1,030,129	+		MIT1002_00927	0.69	-0.1
1,030,129	+		MIT1002_00927	0.69	+1.0
1,030,129	+		MIT1002_00927	0.69	+0.6
1,030,137	-		MIT1002_00927	0.70	-0.1
1,030,137	-		MIT1002_00927	0.70	+0.5
1,030,139	+		MIT1002_00927	0.70	-2.9
1,030,139	+		MIT1002_00927	0.70	+0.6
1,030,214	-		MIT1002_00927	0.77	+1.6
1,030,244	-		MIT1002_00927	0.79	-0.9
1,030,246	+		MIT1002_00927	0.80	-0.2
1,030,254	-		MIT1002_00927	0.80	-0.6
1,030,254	-		MIT1002_00927	0.80	-0.3
1,030,254	-		MIT1002_00927	0.80	-1.4
1,030,342	+		MIT1002_00927	0.88	+1.3
1,030,343	+		MIT1002_00927	0.88	+0.2
1,030,343	+		MIT1002_00927	0.88	+0.9
1,030,343	+		MIT1002_00927	0.88	+0.1
1,030,343	+		MIT1002_00927	0.88	-1.4
1,030,350	-		MIT1002_00927	0.89	+0.9
1,030,426	+				-1.5
1,030,504	+				+0.5
1,030,704	+		MIT1002_00928	0.22	-0.2
1,030,748	+		MIT1002_00928	0.36	+0.4
1,030,748	+		MIT1002_00928	0.36	-0.1
1,030,748	+		MIT1002_00928	0.36	-1.8
1,030,756	-		MIT1002_00928	0.38	-0.2
1,030,756	-		MIT1002_00928	0.38	+0.3
1,030,882	-		MIT1002_00928	0.76	-0.0
1,030,939	+				-0.2
1,031,013	-				+0.6
1,031,050	-				-1.7
1,031,072	+				+0.6
1,031,079	+		MIT1002_00929	0.11	-0.2
1,031,126	+		MIT1002_00929	0.18	+0.8
1,031,176	-		MIT1002_00929	0.25	+0.5
1,031,190	+		MIT1002_00929	0.28	+1.9
1,031,198	-		MIT1002_00929	0.29	-1.4
1,031,203	-		MIT1002_00929	0.30	+0.5
1,031,237	+		MIT1002_00929	0.35	-0.9
1,031,256	+		MIT1002_00929	0.38	-0.8
1,031,305	-		MIT1002_00929	0.45	+0.6
1,031,377	+		MIT1002_00929	0.56	-2.3
1,031,377	+		MIT1002_00929	0.56	-0.7
1,031,385	-		MIT1002_00929	0.57	-1.8
1,031,385	-		MIT1002_00929	0.57	+1.5
1,031,437	+		MIT1002_00929	0.65	+1.4
1,031,437	+		MIT1002_00929	0.65	+1.6
1,031,439	+		MIT1002_00929	0.65	-0.9
1,031,445	-		MIT1002_00929	0.66	-0.2
1,031,456	+		MIT1002_00929	0.68	+0.1
1,031,464	-		MIT1002_00929	0.69	+0.9
1,031,545	+		MIT1002_00929	0.81	+0.2
1,031,575	-		MIT1002_00929	0.86	+1.0
1,031,611	+				+0.0
1,031,621	+				+0.0
1,031,658	+				+0.5
1,031,659	+				-0.4
1,031,666	-				+0.1
1,031,798	-				-1.0
1,031,831	-				+0.3
1,031,866	-				-0.5
1,031,866	-				-1.0
1,031,873	+				-1.4
1,031,873	+				+0.8