Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03957

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
4,439,865	+		MIT1002_03956	0.32	-1.4
4,439,867	-		MIT1002_03956	0.32	+1.0
4,439,897	-		MIT1002_03956	0.36	-1.4
4,439,897	-		MIT1002_03956	0.36	-0.4
4,439,916	+		MIT1002_03956	0.38	+0.1
4,439,927	+		MIT1002_03956	0.39	-0.7
4,439,960	+		MIT1002_03956	0.43	-0.7
4,440,007	+		MIT1002_03956	0.48	+0.2
4,440,007	+		MIT1002_03956	0.48	-0.2
4,440,009	+		MIT1002_03956	0.48	-0.6
4,440,009	+		MIT1002_03956	0.48	-0.4
4,440,009	+		MIT1002_03956	0.48	+0.1
4,440,009	+		MIT1002_03956	0.48	+0.1
4,440,009	+		MIT1002_03956	0.48	+0.6
4,440,009	-		MIT1002_03956	0.48	+0.2
4,440,009	-		MIT1002_03956	0.48	-1.1
4,440,017	-		MIT1002_03956	0.49	-1.3
4,440,017	-		MIT1002_03956	0.49	-0.7
4,440,035	+		MIT1002_03956	0.51	-0.5
4,440,035	+		MIT1002_03956	0.51	-0.2
4,440,035	+		MIT1002_03956	0.51	+0.3
4,440,043	-		MIT1002_03956	0.52	+0.5
4,440,043	-		MIT1002_03956	0.52	+0.1
4,440,044	+		MIT1002_03956	0.52	+0.7
4,440,131	-		MIT1002_03956	0.62	-2.6
4,440,197	-		MIT1002_03956	0.70	-0.9
4,440,214	+		MIT1002_03956	0.72	-0.4
4,440,214	+		MIT1002_03956	0.72	+0.4
4,440,234	-		MIT1002_03956	0.74	+0.6
4,440,251	+		MIT1002_03956	0.76	+1.2
4,440,251	-		MIT1002_03956	0.76	-0.9
4,440,270	+		MIT1002_03956	0.78	+0.3
4,440,443	-				+0.5
4,440,484	-				+0.7
4,440,511	-				+0.4
4,440,603	+				-3.4
4,440,634	-				-0.6
4,440,804	+				+0.6
4,440,930	+				+0.7
4,440,936	+		MIT1002_03957	0.10	+0.1
4,440,974	-		MIT1002_03957	0.14	-2.6
4,441,191	+		MIT1002_03957	0.36	-1.4
4,441,224	+		MIT1002_03957	0.39	-0.4
4,441,334	+		MIT1002_03957	0.50	+0.4
4,441,378	+		MIT1002_03957	0.55	-0.7
4,441,458	+		MIT1002_03957	0.63	+0.2
4,441,458	+		MIT1002_03957	0.63	+0.2
4,441,562	+		MIT1002_03957	0.73	+0.6
4,441,588	+		MIT1002_03957	0.76	-1.3
4,441,847	+				+0.2
4,442,131	+				-0.8
4,442,138	-				-1.0
4,442,213	+				-2.8