Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03793

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
4,239,146	+		MIT1002_03791	0.77	+0.1
4,239,194	+		MIT1002_03791	0.80	-1.2
4,239,197	-		MIT1002_03791	0.81	+0.4
4,239,371	+				-0.1
4,239,372	+				+0.5
4,239,372	+				-0.1
4,239,374	-				-0.5
4,239,441	+				+0.1
4,239,441	+				-0.0
4,239,449	-				+0.3
4,239,454	-				+0.9
4,239,485	-				-0.2
4,239,487	+				+0.1
4,239,487	+				-0.4
4,239,495	-				+0.9
4,239,497	+				-0.2
4,239,500	-				+1.8
4,239,500	-				+0.5
4,240,067	-				-0.9
4,240,067	-				+0.7
4,240,143	+				-1.3
4,240,159	-				+0.8
4,240,193	-				-0.5
4,240,198	+				+0.0
4,240,206	-				+1.5
4,240,206	-				-0.8
4,240,206	-				+0.0
4,240,223	+				-1.0
4,240,310	-		MIT1002_03793	0.14	-0.7
4,240,399	+		MIT1002_03793	0.20	-0.2
4,240,399	+		MIT1002_03793	0.20	-1.3
4,240,407	-		MIT1002_03793	0.21	-0.4
4,240,421	+		MIT1002_03793	0.22	-0.4
4,240,560	-		MIT1002_03793	0.31	-1.8
4,240,575	-		MIT1002_03793	0.32	+0.2
4,240,579	+		MIT1002_03793	0.32	-0.0
4,240,650	-		MIT1002_03793	0.37	+0.5
4,240,658	+		MIT1002_03793	0.37	-0.3
4,240,696	+		MIT1002_03793	0.40	-0.9
4,240,696	+		MIT1002_03793	0.40	+0.5
4,240,704	-		MIT1002_03793	0.40	+1.7
4,240,704	-		MIT1002_03793	0.40	-0.1
4,240,704	-		MIT1002_03793	0.40	-2.9
4,240,704	-		MIT1002_03793	0.40	-0.0
4,240,705	+		MIT1002_03793	0.41	+0.1
4,240,710	+		MIT1002_03793	0.41	-0.7
4,240,710	+		MIT1002_03793	0.41	-3.3
4,240,713	-		MIT1002_03793	0.41	-0.2
4,240,715	+		MIT1002_03793	0.41	+0.8
4,240,718	-		MIT1002_03793	0.41	+1.6
4,240,743	-		MIT1002_03793	0.43	-0.5
4,240,764	+		MIT1002_03793	0.44	-0.9
4,240,772	-		MIT1002_03793	0.45	+0.5
4,240,801	+		MIT1002_03793	0.47	-1.5
4,240,852	+		MIT1002_03793	0.50	-0.4
4,240,852	+		MIT1002_03793	0.50	-2.9
4,240,860	+		MIT1002_03793	0.51	+0.5
4,240,860	-		MIT1002_03793	0.51	+0.4
4,240,868	-		MIT1002_03793	0.51	+0.4
4,240,876	+		MIT1002_03793	0.52	-0.2
4,240,884	+		MIT1002_03793	0.52	+0.6
4,240,884	+		MIT1002_03793	0.52	-0.3
4,240,884	+		MIT1002_03793	0.52	+0.7
4,240,884	-		MIT1002_03793	0.52	-2.5
4,240,892	-		MIT1002_03793	0.53	-1.5
4,240,892	-		MIT1002_03793	0.53	-0.0
4,240,892	-		MIT1002_03793	0.53	+0.3
4,240,927	-		MIT1002_03793	0.55	+0.6
4,240,932	+		MIT1002_03793	0.56	-0.6
4,240,960	-		MIT1002_03793	0.58	+0.1
4,240,960	-		MIT1002_03793	0.58	-1.5
4,241,001	+		MIT1002_03793	0.60	+2.9
4,241,045	+		MIT1002_03793	0.63	-1.9
4,241,059	+		MIT1002_03793	0.64	-0.5
4,241,059	+		MIT1002_03793	0.64	+0.5
4,241,165	-		MIT1002_03793	0.71	-0.7
4,241,177	+		MIT1002_03793	0.72	+0.7
4,241,177	+		MIT1002_03793	0.72	-0.4
4,241,185	-		MIT1002_03793	0.73	+0.1
4,241,185	-		MIT1002_03793	0.73	-1.2
4,241,195	-		MIT1002_03793	0.73	+0.1
4,241,243	-		MIT1002_03793	0.76	+1.9
4,241,243	-		MIT1002_03793	0.76	-1.6
4,241,245	+		MIT1002_03793	0.77	-1.7
4,241,268	+		MIT1002_03793	0.78	-0.3
4,241,381	-		MIT1002_03793	0.86	-0.3
4,241,413	-		MIT1002_03793	0.88	-0.0
4,241,430	-		MIT1002_03793	0.89	-0.2
4,241,440	+		MIT1002_03793	0.90	-0.0
4,241,440	+		MIT1002_03793	0.90	-0.4
4,241,440	+		MIT1002_03793	0.90	-0.1
4,241,440	+		MIT1002_03793	0.90	-0.2
4,241,440	+		MIT1002_03793	0.90	+0.7
4,241,440	+		MIT1002_03793	0.90	-0.1
4,241,448	-				-0.1
4,241,475	+				+0.1
4,241,484	+				+0.7
4,241,545	-				-1.9
4,241,545	-				+0.3
4,241,662	-				-2.2
4,241,666	+				+0.1
4,241,669	-				+0.3
4,241,674	-				+0.0
4,241,674	-				-1.7
4,241,674	-				-0.6
4,241,674	-				-1.2
4,241,674	-				-0.2
4,241,674	-				+0.3
4,241,705	-				-0.5
4,241,713	+				+0.3
4,241,726	-		MIT1002_03794	0.11	-1.9
4,241,759	+		MIT1002_03794	0.14	+0.5
4,241,759	+		MIT1002_03794	0.14	-0.2
4,241,767	-		MIT1002_03794	0.14	+0.1
4,241,786	-		MIT1002_03794	0.16	+0.1
4,241,791	-		MIT1002_03794	0.16	-0.4
4,241,807	+		MIT1002_03794	0.18	-0.3
4,241,812	+		MIT1002_03794	0.18	-0.9
4,241,823	+		MIT1002_03794	0.19	-3.9
4,241,823	+		MIT1002_03794	0.19	+0.2
4,241,823	+		MIT1002_03794	0.19	-0.3
4,241,823	+		MIT1002_03794	0.19	-0.9
4,241,831	-		MIT1002_03794	0.20	-0.1
4,241,927	-		MIT1002_03794	0.28	-0.6
4,241,965	-		MIT1002_03794	0.32	-0.5
4,242,080	+		MIT1002_03794	0.42	+0.7
4,242,080	+		MIT1002_03794	0.42	-0.3
4,242,088	-		MIT1002_03794	0.42	-0.1
4,242,088	-		MIT1002_03794	0.42	+0.7
4,242,088	-		MIT1002_03794	0.42	-0.1
4,242,088	-		MIT1002_03794	0.42	-0.9
4,242,090	+		MIT1002_03794	0.43	-1.0
4,242,090	+		MIT1002_03794	0.43	-0.0
4,242,098	-		MIT1002_03794	0.43	-0.8
4,242,098	-		MIT1002_03794	0.43	-0.7
4,242,166	-		MIT1002_03794	0.49	+0.1
4,242,298	-		MIT1002_03794	0.61	-0.3
4,242,308	+		MIT1002_03794	0.62	+0.6
4,242,328	-		MIT1002_03794	0.63	+0.6
4,242,422	+		MIT1002_03794	0.72	-1.0
4,242,422	+		MIT1002_03794	0.72	-0.5
4,242,422	+		MIT1002_03794	0.72	+0.6
4,242,440	-		MIT1002_03794	0.73	-0.7
4,242,464	+		MIT1002_03794	0.75	+0.9
4,242,467	-		MIT1002_03794	0.76	-0.5
4,242,472	-		MIT1002_03794	0.76	-1.7
4,242,485	+		MIT1002_03794	0.77	-1.6
4,242,491	-		MIT1002_03794	0.78	-1.9
4,242,569	+		MIT1002_03794	0.85	-2.0