Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03114

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
3,467,225	-		MIT1002_03113	0.13	+1.0
3,467,245	-		MIT1002_03113	0.15	-0.2
3,467,250	+		MIT1002_03113	0.16	+0.8
3,467,286	-		MIT1002_03113	0.20	-0.2
3,467,429	+		MIT1002_03113	0.37	-0.7
3,467,487	+		MIT1002_03113	0.44	+0.2
3,467,496	-		MIT1002_03113	0.45	-1.0
3,467,594	-		MIT1002_03113	0.57	-0.1
3,467,608	+		MIT1002_03113	0.59	+1.3
3,467,630	+		MIT1002_03113	0.61	-0.1
3,467,638	-		MIT1002_03113	0.62	+1.2
3,467,682	+		MIT1002_03113	0.67	+0.3
3,467,714	+		MIT1002_03113	0.71	-0.5
3,467,755	-		MIT1002_03113	0.76	-0.3
3,467,755	-		MIT1002_03113	0.76	-2.0
3,467,938	-				+1.2
3,467,959	-				+1.4
3,468,022	-				-0.2
3,468,059	-				+1.6
3,468,059	-				+0.6
3,468,059	-				-0.9
3,468,103	+				-1.2
3,468,245	-				-0.6
3,468,248	+				+0.6
3,468,302	+		MIT1002_03114	0.10	-0.6
3,468,312	-		MIT1002_03114	0.11	-0.9
3,468,342	+		MIT1002_03114	0.12	-0.2
3,468,858	+		MIT1002_03114	0.38	+0.4
3,468,930	+		MIT1002_03114	0.42	-1.4
3,468,938	-		MIT1002_03114	0.42	-1.6
3,469,055	-		MIT1002_03114	0.48	+0.4
3,469,105	+		MIT1002_03114	0.50	-0.9
3,469,302	-		MIT1002_03114	0.60	-2.6
3,469,540	+		MIT1002_03114	0.72	-0.9
3,469,696	-		MIT1002_03114	0.80	-0.9
3,469,710	+		MIT1002_03114	0.81	-0.9
3,469,711	+		MIT1002_03114	0.81	-1.2
3,469,751	-		MIT1002_03114	0.83	-0.6
3,469,792	+		MIT1002_03114	0.85	-1.2
3,469,995	+				-1.2
3,469,995	+				-1.2
3,470,110	+				+0.4
3,470,110	+				-0.6
3,470,110	+				-0.0
3,470,118	-				-2.8
3,470,118	-				+0.2
3,470,118	-				+0.4
3,470,120	+				-0.6
3,470,133	-				-2.9
3,470,162	+		MIT1002_03115	0.18	+0.5
3,470,163	-		MIT1002_03115	0.18	+0.0
3,470,197	-		MIT1002_03115	0.28	-0.1
3,470,213	+		MIT1002_03115	0.33	+0.7
3,470,231	+		MIT1002_03115	0.38	-0.1
3,470,284	+		MIT1002_03115	0.54	+1.7
3,470,292	-		MIT1002_03115	0.56	+0.7
3,470,292	-		MIT1002_03115	0.56	-0.7
3,470,292	-		MIT1002_03115	0.56	-2.1
3,470,333	-		MIT1002_03115	0.68	+0.3
3,470,333	-		MIT1002_03115	0.68	-0.6
3,470,448	+				-0.9
3,470,475	+				-1.9
3,470,494	-				-0.6
3,470,494	-				+0.2
3,470,582	-				-3.1
3,470,618	+				-0.9
3,470,681	-				-3.9
3,470,724	+				-2.8
3,470,757	-		MIT1002_03116	0.12	-1.4
3,470,800	-		MIT1002_03116	0.16	-0.9
3,470,811	+		MIT1002_03116	0.17	-3.3
3,470,862	-		MIT1002_03116	0.22	-1.8
3,470,897	-		MIT1002_03116	0.25	-2.5
3,470,941	+		MIT1002_03116	0.29	-3.2
3,470,959	-		MIT1002_03116	0.31	-1.4
3,471,004	-		MIT1002_03116	0.35	-3.4