Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03062

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
3,414,809	-		MIT1002_03060	0.86	+2.1
3,414,902	+				+1.2
3,414,902	+				+0.3
3,414,910	-				+1.1
3,414,910	-				-0.2
3,414,923	-				+0.6
3,414,999	-				-0.3
3,415,033	-				+0.6
3,415,114	+		MIT1002_03061	0.19	+0.1
3,415,253	+		MIT1002_03061	0.39	-0.4
3,415,363	+		MIT1002_03061	0.55	-0.1
3,415,376	+		MIT1002_03061	0.57	+1.0
3,415,390	+		MIT1002_03061	0.59	-0.6
3,415,392	-		MIT1002_03061	0.59	+0.7
3,415,447	+		MIT1002_03061	0.67	+0.7
3,415,464	+		MIT1002_03061	0.70	+0.3
3,415,466	-		MIT1002_03061	0.70	+0.7
3,415,477	+		MIT1002_03061	0.71	+0.8
3,415,483	+		MIT1002_03061	0.72	-1.3
3,415,499	+		MIT1002_03061	0.75	+0.8
3,415,507	+		MIT1002_03061	0.76	-2.7
3,415,509	+		MIT1002_03061	0.76	-0.8
3,415,527	-		MIT1002_03061	0.79	-0.6
3,415,527	-		MIT1002_03061	0.79	+0.3
3,415,621	-				-2.7
3,415,621	-				-1.9
3,415,626	+				+0.5
3,415,639	+				-1.0
3,415,670	-				-0.9
3,415,687	+				+1.3
3,415,712	+				-1.7
3,415,783	-				-5.7
3,415,816	-				-5.2
3,416,040	+		MIT1002_03062	0.36	-3.9
3,416,048	-		MIT1002_03062	0.37	-5.0
3,416,201	-		MIT1002_03062	0.56	-4.9
3,416,201	-		MIT1002_03062	0.56	-3.1
3,416,250	+		MIT1002_03062	0.62	-2.3
3,416,258	-		MIT1002_03062	0.63	-2.6
3,416,316	+		MIT1002_03062	0.70	-4.3
3,416,324	-		MIT1002_03062	0.71	-2.5
3,416,357	+		MIT1002_03062	0.75	-3.3
3,416,401	+		MIT1002_03062	0.80	-3.7
3,416,546	-				-4.5
3,416,726	-		MIT1002_03063	0.26	-0.4
3,416,750	-		MIT1002_03063	0.31	-0.9
3,416,790	+		MIT1002_03063	0.38	-0.6
3,416,827	-		MIT1002_03063	0.45	+0.9
3,416,827	-		MIT1002_03063	0.45	+0.4
3,416,833	-		MIT1002_03063	0.46	+1.0
3,416,843	+		MIT1002_03063	0.48	-0.2
3,416,843	+		MIT1002_03063	0.48	+0.3
3,416,851	-		MIT1002_03063	0.50	+1.4
3,416,851	-		MIT1002_03063	0.50	-2.7
3,416,919	-		MIT1002_03063	0.62	-0.6
3,416,919	-		MIT1002_03063	0.62	-0.0
3,416,936	+		MIT1002_03063	0.65	-1.1
3,416,936	+		MIT1002_03063	0.65	-0.5
3,416,936	+		MIT1002_03063	0.65	+0.8
3,416,936	+		MIT1002_03063	0.65	-2.7
3,416,936	+		MIT1002_03063	0.65	-0.5
3,416,936	+		MIT1002_03063	0.65	+0.1
3,417,041	+		MIT1002_03063	0.85	+0.2
3,417,139	-				+2.2
3,417,141	+				+0.4
3,417,239	+				-2.4
3,417,252	-				-0.9