Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02934

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
3,262,475	-		MIT1002_02933	0.75	-0.3
3,262,527	-		MIT1002_02933	0.77	+0.1
3,262,594	+		MIT1002_02933	0.80	+0.4
3,262,594	+		MIT1002_02933	0.80	-0.7
3,262,643	+		MIT1002_02933	0.82	-1.1
3,262,643	+		MIT1002_02933	0.82	+0.8
3,262,643	+		MIT1002_02933	0.82	-0.1
3,262,651	-		MIT1002_02933	0.83	+0.3
3,262,670	+		MIT1002_02933	0.83	+0.4
3,262,678	-		MIT1002_02933	0.84	+2.1
3,262,683	-		MIT1002_02933	0.84	+0.6
3,262,761	+		MIT1002_02933	0.88	-1.7
3,262,763	-		MIT1002_02933	0.88	+0.0
3,262,814	+				+0.0
3,262,902	+				+0.4
3,263,024	+				+1.0
3,263,024	+				-3.3
3,263,032	-				+0.1
3,263,096	-				-0.9
3,263,102	+				-1.7
3,263,146	+				-0.8
3,263,154	-				+1.8
3,263,260	+				-0.0
3,263,268	-				-0.6
3,263,268	-				+0.7
3,263,268	-				-0.9
3,263,268	-				+0.4
3,263,379	+				+0.1
3,263,532	+				+1.0
3,263,532	-				+0.4
3,263,533	-				-0.2
3,263,594	+				-0.3
3,263,604	+				-0.3
3,263,677	-		MIT1002_02934	0.13	-0.7
3,263,705	+		MIT1002_02934	0.15	+0.9
3,263,734	+		MIT1002_02934	0.16	-0.5
3,263,742	-		MIT1002_02934	0.17	+0.8
3,263,815	-		MIT1002_02934	0.21	-0.4
3,263,846	+		MIT1002_02934	0.23	+0.4
3,263,984	+		MIT1002_02934	0.32	-0.9
3,263,988	-		MIT1002_02934	0.32	-1.6
3,263,989	+		MIT1002_02934	0.32	-1.2
3,263,997	-		MIT1002_02934	0.33	+0.3
3,264,014	+		MIT1002_02934	0.34	-0.2
3,264,075	-		MIT1002_02934	0.38	-0.7
3,264,163	+		MIT1002_02934	0.43	-0.9
3,264,163	+		MIT1002_02934	0.43	-0.4
3,264,163	+		MIT1002_02934	0.43	-0.8
3,264,171	-		MIT1002_02934	0.44	-0.3
3,264,297	+		MIT1002_02934	0.51	-1.7
3,264,300	-		MIT1002_02934	0.52	+0.6
3,264,305	-		MIT1002_02934	0.52	+0.2
3,264,775	+		MIT1002_02934	0.81	-0.3
3,264,790	+		MIT1002_02934	0.82	-0.3
3,264,790	+		MIT1002_02934	0.82	-0.1
3,264,965	-				+1.1
3,264,982	-				+0.1
3,265,016	+				-0.1
3,265,113	-				-1.6
3,265,113	-				+0.9
3,265,123	-				-1.1
3,265,131	+				+0.4
3,265,240	+		MIT1002_02935	0.16	-0.8
3,265,254	+		MIT1002_02935	0.18	+1.9
3,265,262	-		MIT1002_02935	0.19	-0.7
3,265,262	-		MIT1002_02935	0.19	+0.6
3,265,267	-		MIT1002_02935	0.19	-1.8
3,265,275	+		MIT1002_02935	0.20	+1.2
3,265,285	-		MIT1002_02935	0.21	-0.1
3,265,304	+		MIT1002_02935	0.23	+0.9
3,265,355	-		MIT1002_02935	0.28	+0.6
3,265,394	-		MIT1002_02935	0.32	+0.9
3,265,408	-		MIT1002_02935	0.33	+1.1
3,265,417	-		MIT1002_02935	0.34	-0.1
3,265,495	-		MIT1002_02935	0.42	-0.1
3,265,563	+		MIT1002_02935	0.49	+2.2
3,265,571	-		MIT1002_02935	0.50	-0.6
3,265,574	+		MIT1002_02935	0.50	-1.8
3,265,608	-		MIT1002_02935	0.54	-1.0
3,265,645	-		MIT1002_02935	0.58	+0.5
3,265,649	-		MIT1002_02935	0.58	-0.9
3,265,662	+		MIT1002_02935	0.59	-1.4
3,265,662	+		MIT1002_02935	0.59	+1.6
3,265,667	+		MIT1002_02935	0.60	+0.7
3,265,669	-		MIT1002_02935	0.60	+1.8
3,265,669	-		MIT1002_02935	0.60	+0.2
3,265,670	-		MIT1002_02935	0.60	+0.7
3,265,670	-		MIT1002_02935	0.60	-0.9
3,265,675	-		MIT1002_02935	0.61	+0.4
3,265,675	-		MIT1002_02935	0.61	-1.2
3,265,676	-		MIT1002_02935	0.61	-0.2
3,265,761	-		MIT1002_02935	0.69	-0.9
3,265,768	-		MIT1002_02935	0.70	+0.0
3,265,768	-		MIT1002_02935	0.70	-1.6
3,265,770	+		MIT1002_02935	0.70	-0.2
3,265,770	+		MIT1002_02935	0.70	+1.3
3,265,778	-		MIT1002_02935	0.71	+0.5
3,265,778	-		MIT1002_02935	0.71	-0.1
3,265,778	-		MIT1002_02935	0.71	-0.3
3,265,778	-		MIT1002_02935	0.71	+0.9
3,265,806	-		MIT1002_02935	0.74	-0.9
3,265,817	+		MIT1002_02935	0.75	+0.6
3,265,825	-		MIT1002_02935	0.76	+0.4
3,265,825	-		MIT1002_02935	0.76	-0.4
3,265,825	-		MIT1002_02935	0.76	+0.6
3,265,831	-		MIT1002_02935	0.76	+0.3
3,265,840	-		MIT1002_02935	0.77	+0.0
3,265,904	-		MIT1002_02935	0.84	-0.6
3,265,904	-		MIT1002_02935	0.84	-0.2
3,265,922	+		MIT1002_02935	0.86	-1.4
3,265,922	+		MIT1002_02935	0.86	-0.5
3,265,951	+		MIT1002_02935	0.89	+0.3
3,265,958	+		MIT1002_02935	0.89	+1.6
3,265,958	+		MIT1002_02935	0.89	-0.7
3,265,966	-				-0.7
3,266,014	+				+0.5
3,266,025	+				-0.1
3,266,025	+				-1.4
3,266,025	+				-0.9
3,266,025	+				-0.8
3,266,025	+				+0.9
3,266,033	-				-0.4
3,266,033	-				+0.9
3,266,033	-				-0.4
3,266,057	-				+0.4