Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02915

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
3,238,102	-		MIT1002_02913	0.31	-0.3
3,238,108	+		MIT1002_02913	0.32	+0.4
3,238,118	+		MIT1002_02913	0.34	+0.6
3,238,126	-		MIT1002_02913	0.36	-1.9
3,238,212	+		MIT1002_02913	0.54	+0.4
3,238,217	-		MIT1002_02913	0.55	-1.2
3,238,431	+				-0.6
3,238,603	+		MIT1002_02914	0.17	+0.0
3,238,636	-		MIT1002_02914	0.26	+0.6
3,238,665	-		MIT1002_02914	0.33	+0.5
3,238,698	-		MIT1002_02914	0.42	+0.6
3,238,715	-		MIT1002_02914	0.46	+0.1
3,238,757	+		MIT1002_02914	0.57	+0.1
3,238,778	-		MIT1002_02914	0.63	+1.4
3,238,794	+		MIT1002_02914	0.67	+0.7
3,238,802	-		MIT1002_02914	0.69	-0.2
3,238,829	+		MIT1002_02914	0.76	-0.2
3,238,838	-		MIT1002_02914	0.79	+0.6
3,238,838	-		MIT1002_02914	0.79	+1.0
3,238,856	+		MIT1002_02914	0.83	+0.9
3,238,921	-				+1.6
3,238,975	+				-0.2
3,239,054	-				+0.3
3,239,109	-				+0.7
3,239,212	-				+0.2
3,239,212	-				+0.5
3,239,256	+		MIT1002_02915	0.13	+0.6
3,239,332	+		MIT1002_02915	0.19	-0.7
3,239,361	+		MIT1002_02915	0.21	-1.1
3,239,382	+		MIT1002_02915	0.23	+0.4
3,239,382	+		MIT1002_02915	0.23	-0.9
3,239,440	-		MIT1002_02915	0.27	+0.9
3,239,455	+		MIT1002_02915	0.28	-0.4
3,239,541	+		MIT1002_02915	0.34	-1.3
3,239,549	-		MIT1002_02915	0.35	+0.6
3,239,549	-		MIT1002_02915	0.35	-0.6
3,239,561	+		MIT1002_02915	0.36	-0.5
3,239,611	-		MIT1002_02915	0.40	-1.3
3,239,621	+		MIT1002_02915	0.40	+0.3
3,239,734	+		MIT1002_02915	0.49	+0.4
3,239,734	+		MIT1002_02915	0.49	-0.5
3,239,734	+		MIT1002_02915	0.49	-0.2
3,239,742	-		MIT1002_02915	0.49	+0.5
3,239,791	+		MIT1002_02915	0.53	+0.3
3,239,791	+		MIT1002_02915	0.53	-0.4
3,239,791	+		MIT1002_02915	0.53	+0.2
3,239,791	+		MIT1002_02915	0.53	-1.2
3,239,791	+		MIT1002_02915	0.53	+0.4
3,239,791	+		MIT1002_02915	0.53	+1.0
3,239,791	+		MIT1002_02915	0.53	+1.1
3,239,791	+		MIT1002_02915	0.53	-1.0
3,239,799	-		MIT1002_02915	0.54	-2.8
3,239,799	-		MIT1002_02915	0.54	-0.5
3,239,799	-		MIT1002_02915	0.54	-0.0
3,239,799	-		MIT1002_02915	0.54	-0.5
3,239,799	-		MIT1002_02915	0.54	-3.2
3,239,799	-		MIT1002_02915	0.54	+0.7
3,239,799	-		MIT1002_02915	0.54	+0.2
3,239,799	-		MIT1002_02915	0.54	-0.2
3,239,799	-		MIT1002_02915	0.54	+0.6
3,239,809	-		MIT1002_02915	0.54	-0.8
3,239,832	-		MIT1002_02915	0.56	+0.2
3,239,948	+		MIT1002_02915	0.65	+0.5
3,239,956	-		MIT1002_02915	0.65	+1.5
3,240,045	+		MIT1002_02915	0.72	+1.0
3,240,141	-		MIT1002_02915	0.79	-0.1
3,240,141	-		MIT1002_02915	0.79	+0.5
3,240,147	+		MIT1002_02915	0.79	+0.6
3,240,160	-		MIT1002_02915	0.80	-2.3
3,240,174	-		MIT1002_02915	0.81	+1.0
3,240,210	+		MIT1002_02915	0.84	-1.8
3,240,236	-		MIT1002_02915	0.86	+0.7
3,240,273	+		MIT1002_02915	0.89	-1.2
3,240,275	+		MIT1002_02915	0.89	-0.6
3,240,372	-				+1.0
3,240,484	+				+0.4
3,240,485	+				-0.2
3,240,485	+				-0.6
3,240,711	+		MIT1002_02916	0.18	-0.9
3,240,775	-		MIT1002_02916	0.32	+0.4
3,240,793	+		MIT1002_02916	0.35	+1.1
3,240,812	+		MIT1002_02916	0.40	-0.6
3,240,820	-		MIT1002_02916	0.41	-1.2
3,240,904	-		MIT1002_02916	0.59	+0.3
3,240,999	-		MIT1002_02916	0.79	-0.4