Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02812

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
3,117,037	+		MIT1002_02811	0.57	-2.9
3,117,047	+		MIT1002_02811	0.58	-2.1
3,117,055	-		MIT1002_02811	0.58	-3.3
3,117,055	-		MIT1002_02811	0.58	-3.9
3,117,204	+		MIT1002_02811	0.66	-3.2
3,117,204	+		MIT1002_02811	0.66	-3.1
3,117,204	+		MIT1002_02811	0.66	+0.4
3,117,204	+		MIT1002_02811	0.66	-5.4
3,117,222	+		MIT1002_02811	0.67	-1.0
3,117,222	+		MIT1002_02811	0.67	-3.2
3,117,230	-		MIT1002_02811	0.68	-2.9
3,117,230	-		MIT1002_02811	0.68	-4.3
3,117,266	+		MIT1002_02811	0.69	-5.3
3,117,266	+		MIT1002_02811	0.69	-5.5
3,117,274	-		MIT1002_02811	0.70	-2.5
3,117,274	-		MIT1002_02811	0.70	-3.9
3,117,274	-		MIT1002_02811	0.70	-3.5
3,117,321	+		MIT1002_02811	0.72	-1.2
3,117,418	-		MIT1002_02811	0.78	-4.9
3,117,435	+		MIT1002_02811	0.79	-3.3
3,117,441	-		MIT1002_02811	0.79	-2.4
3,117,458	-		MIT1002_02811	0.80	-4.4
3,117,458	-		MIT1002_02811	0.80	-2.1
3,117,458	-		MIT1002_02811	0.80	-3.9
3,117,458	-		MIT1002_02811	0.80	-3.8
3,117,458	-		MIT1002_02811	0.80	-4.2
3,117,458	-		MIT1002_02811	0.80	-0.6
3,117,458	-		MIT1002_02811	0.80	-1.4
3,117,486	-		MIT1002_02811	0.81	-2.8
3,117,699	-				-3.5
3,117,801	-				-3.9
3,117,801	-				-0.6
3,117,825	+				-3.0
3,117,828	-				-0.6
3,117,830	+				-1.7
3,117,849	+				-2.3
3,117,851	+				-4.1
3,117,913	+				-2.7
3,117,913	+				-2.7
3,117,913	+				-2.6
3,117,913	+				-2.8
3,118,086	+		MIT1002_02812	0.60	-4.1
3,118,086	+		MIT1002_02812	0.60	-1.8
3,118,086	+		MIT1002_02812	0.60	-2.2
3,118,094	-		MIT1002_02812	0.62	-0.6
3,118,094	-		MIT1002_02812	0.62	-0.8
3,118,179	+		MIT1002_02812	0.88	-3.8
3,118,179	+		MIT1002_02812	0.88	-2.2
3,118,189	+				-3.5
3,118,333	-				+0.6
3,118,334	+				-0.7
3,118,340	-				-1.0
3,118,379	-		MIT1002_02813	0.12	+1.1
3,118,379	-		MIT1002_02813	0.12	-0.4
3,118,379	-		MIT1002_02813	0.12	-2.3
3,118,403	-		MIT1002_02813	0.14	-0.7
3,118,505	+		MIT1002_02813	0.23	-0.6
3,118,518	-		MIT1002_02813	0.25	-1.2
3,118,532	-		MIT1002_02813	0.26	-1.4
3,118,540	-		MIT1002_02813	0.27	+1.0
3,118,561	+		MIT1002_02813	0.28	-0.5
3,118,561	+		MIT1002_02813	0.28	-2.6
3,118,569	+		MIT1002_02813	0.29	-0.2
3,118,569	-		MIT1002_02813	0.29	-1.2
3,118,569	-		MIT1002_02813	0.29	-1.2
3,118,569	-		MIT1002_02813	0.29	+0.3
3,118,569	-		MIT1002_02813	0.29	-0.1
3,118,569	-		MIT1002_02813	0.29	+0.2
3,118,569	-		MIT1002_02813	0.29	-0.1
3,118,571	+		MIT1002_02813	0.29	-2.3
3,118,589	+		MIT1002_02813	0.31	-3.3
3,118,602	-		MIT1002_02813	0.32	+1.2
3,118,618	-		MIT1002_02813	0.34	+0.6
3,118,778	+		MIT1002_02813	0.48	-2.8
3,118,786	-		MIT1002_02813	0.49	-2.5
3,118,793	-		MIT1002_02813	0.49	-0.3
3,118,793	-		MIT1002_02813	0.49	-3.4
3,118,836	-		MIT1002_02813	0.53	-1.0
3,118,916	-		MIT1002_02813	0.60	-1.4
3,118,917	+		MIT1002_02813	0.60	+0.4
3,118,917	+		MIT1002_02813	0.60	-4.3
3,118,925	-		MIT1002_02813	0.61	-0.2
3,118,926	-		MIT1002_02813	0.61	-0.1
3,119,009	+		MIT1002_02813	0.69	-2.3
3,119,098	+		MIT1002_02813	0.77	-2.1
3,119,106	-		MIT1002_02813	0.77	-0.2
3,119,131	-		MIT1002_02813	0.80	-1.3
3,119,206	-		MIT1002_02813	0.86	-0.2
3,119,206	-		MIT1002_02813	0.86	+1.1
3,119,211	-		MIT1002_02813	0.87	-3.3
3,119,211	-		MIT1002_02813	0.87	+0.1