Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02776

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
3,075,922	-		MIT1002_02775	0.13	-0.1
3,075,954	+		MIT1002_02775	0.17	+0.2
3,075,981	-		MIT1002_02775	0.19	-1.2
3,076,034	+		MIT1002_02775	0.24	-1.8
3,076,112	-		MIT1002_02775	0.32	-1.8
3,076,118	-		MIT1002_02775	0.33	-0.9
3,076,176	+		MIT1002_02775	0.38	+1.1
3,076,184	-		MIT1002_02775	0.39	-0.4
3,076,184	-		MIT1002_02775	0.39	-0.6
3,076,202	+		MIT1002_02775	0.41	-0.3
3,076,208	-		MIT1002_02775	0.42	-0.5
3,076,218	-		MIT1002_02775	0.43	+1.1
3,076,603	+		MIT1002_02775	0.80	-0.2
3,076,610	+		MIT1002_02775	0.81	+0.8
3,076,611	-		MIT1002_02775	0.81	-0.0
3,076,643	+		MIT1002_02775	0.84	+0.1
3,076,643	+		MIT1002_02775	0.84	-0.6
3,076,651	-		MIT1002_02775	0.85	-0.1
3,076,681	+		MIT1002_02775	0.88	+0.9
3,076,745	+				-0.8
3,076,746	+				-1.1
3,076,947	+				+0.8
3,076,994	-		MIT1002_02776	0.12	-0.2
3,077,003	+		MIT1002_02776	0.13	-0.4
3,077,003	+		MIT1002_02776	0.13	+1.2
3,077,011	-		MIT1002_02776	0.14	+0.1
3,077,075	-		MIT1002_02776	0.21	-0.2
3,077,080	+		MIT1002_02776	0.22	+0.4
3,077,088	-		MIT1002_02776	0.23	+0.5
3,077,165	-		MIT1002_02776	0.31	+0.5
3,077,165	-		MIT1002_02776	0.31	+0.2
3,077,183	-		MIT1002_02776	0.33	-0.3
3,077,447	-		MIT1002_02776	0.62	+0.0
3,077,537	+		MIT1002_02776	0.72	+1.3
3,077,545	-		MIT1002_02776	0.73	-0.6
3,077,560	-		MIT1002_02776	0.75	+1.7
3,077,588	-		MIT1002_02776	0.78	-0.0
3,077,749	+				+1.1
3,077,799	+				+0.5
3,077,807	-				-0.4
3,077,807	-				+0.5
3,077,860	+				+0.5
3,077,872	-				+1.2
3,077,881	-				-0.8
3,077,910	+				+1.1
3,078,038	+				+1.0
3,078,085	-		MIT1002_02777	0.12	-0.2
3,078,325	-		MIT1002_02777	0.26	-2.2
3,078,331	+		MIT1002_02777	0.27	+0.5
3,078,339	-		MIT1002_02777	0.27	+0.5
3,078,353	-		MIT1002_02777	0.28	+0.2
3,078,705	+		MIT1002_02777	0.50	+1.4
3,078,715	+		MIT1002_02777	0.51	+0.3
3,078,715	+		MIT1002_02777	0.51	+0.4
3,078,723	-		MIT1002_02777	0.51	+0.0