Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02755

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
3,057,567	+		MIT1002_02753	0.62	+0.9
3,057,653	-		MIT1002_02753	0.69	-0.2
3,057,698	+		MIT1002_02753	0.73	-0.4
3,057,828	-		MIT1002_02753	0.84	-0.4
3,057,986	+				-2.9
3,058,005	-				+0.4
3,058,028	-				-0.0
3,058,065	+				+0.1
3,058,092	+				-0.0
3,058,344	+		MIT1002_02754	0.53	-1.1
3,058,409	+				-0.8
3,058,541	-				-0.3
3,058,623	+				-1.4
3,058,627	+				-1.8
3,058,631	-				-1.6
3,058,631	-				+0.9
3,058,684	-				-0.2
3,058,686	+				-2.3
3,058,694	-				+0.4
3,058,739	+				+0.3
3,058,773	-		MIT1002_02755	0.12	-1.6
3,059,022	-		MIT1002_02755	0.25	-1.2
3,059,094	-		MIT1002_02755	0.29	-0.7
3,059,113	+		MIT1002_02755	0.30	-1.1
3,059,173	-		MIT1002_02755	0.33	-2.6
3,059,251	+		MIT1002_02755	0.37	-2.6
3,059,277	+		MIT1002_02755	0.38	-1.5
3,059,322	+		MIT1002_02755	0.41	-2.2
3,059,460	-		MIT1002_02755	0.48	-3.2
3,059,534	+		MIT1002_02755	0.52	-2.0
3,059,652	+		MIT1002_02755	0.58	-0.1
3,059,745	+		MIT1002_02755	0.63	+1.4
3,059,745	+		MIT1002_02755	0.63	-0.6
3,059,745	+		MIT1002_02755	0.63	-0.1
3,059,778	+		MIT1002_02755	0.65	+0.7
3,059,821	+		MIT1002_02755	0.67	-0.2
3,059,826	-		MIT1002_02755	0.67	-1.5
3,059,854	-		MIT1002_02755	0.69	+0.6
3,059,902	+		MIT1002_02755	0.71	-0.8
3,059,910	-		MIT1002_02755	0.72	+0.1
3,059,912	+		MIT1002_02755	0.72	-1.6
3,060,194	+		MIT1002_02755	0.87	+1.5
3,060,194	+		MIT1002_02755	0.87	+1.4
3,060,194	+		MIT1002_02755	0.87	-1.2
3,060,202	-		MIT1002_02755	0.87	+0.7
3,060,273	-				+0.0
3,060,337	+				-1.6
3,060,337	+				+0.9
3,060,337	+				-0.7
3,060,345	-				-1.5
3,060,350	+				-0.3
3,060,358	-				-0.3
3,060,358	-				-0.4
3,060,412	+				-0.7
3,060,463	+				+1.1
3,060,530	-				+0.0
3,060,530	-				-0.6
3,060,564	+				+0.2
3,060,616	-				+1.8
3,060,640	-				+2.1
3,060,666	-				+0.5
3,060,729	-				-2.1
3,061,374	-				-0.5
3,061,376	+				-6.3
3,061,384	-				-3.6