Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02727

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
3,027,703	+				+0.4
3,027,706	-				-0.7
3,027,727	+		MIT1002_02725	0.12	-0.7
3,027,734	+		MIT1002_02725	0.13	-0.6
3,027,734	+		MIT1002_02725	0.13	-1.5
3,027,734	+		MIT1002_02725	0.13	-1.1
3,027,734	+		MIT1002_02725	0.13	+1.1
3,027,734	+		MIT1002_02725	0.13	-0.5
3,027,742	-		MIT1002_02725	0.15	+0.9
3,027,742	-		MIT1002_02725	0.15	-1.0
3,027,742	-		MIT1002_02725	0.15	-0.4
3,027,742	-		MIT1002_02725	0.15	-0.8
3,027,927	+		MIT1002_02725	0.53	+0.3
3,027,943	+		MIT1002_02725	0.56	-0.0
3,027,960	+		MIT1002_02725	0.59	+2.0
3,027,975	-		MIT1002_02725	0.63	+0.1
3,028,116	+				+0.2
3,028,116	+				+1.7
3,028,118	+				-0.8
3,028,118	+				-1.0
3,028,124	-				-0.3
3,028,124	-				+0.0
3,028,126	+				+0.5
3,028,126	-				+1.5
3,028,126	-				+0.7
3,028,128	+				+0.6
3,028,261	+				-1.8
3,028,294	-		MIT1002_02726	0.16	+0.5
3,028,294	-		MIT1002_02726	0.16	+0.9
3,028,340	-		MIT1002_02726	0.29	-0.7
3,028,360	-		MIT1002_02726	0.35	+0.1
3,028,415	+		MIT1002_02726	0.51	-1.1
3,028,422	+		MIT1002_02726	0.53	-0.5
3,028,430	-		MIT1002_02726	0.56	+1.0
3,028,469	+		MIT1002_02726	0.67	+0.9
3,028,590	-				-0.9
3,028,590	-				+1.3
3,029,481	+				+0.2
3,029,482	-				-0.0
3,029,522	+				-1.4
3,029,530	+				-0.3
3,029,533	+				+0.4
3,029,639	+				+0.7
3,029,763	+				-0.2
3,029,790	-				-1.0
3,029,803	+				+1.1
3,029,803	+				+1.4
3,029,803	+				-2.3
3,029,847	+				+0.4
3,029,847	+				+0.1
3,029,847	+				+0.2
3,029,883	+				-1.7
3,029,987	-		MIT1002_02728	0.28	+1.0
3,030,027	-		MIT1002_02728	0.36	+0.2
3,030,032	-		MIT1002_02728	0.37	-0.4
3,030,034	-		MIT1002_02728	0.37	+0.6
3,030,041	+		MIT1002_02728	0.38	+0.7
3,030,041	+		MIT1002_02728	0.38	-0.6
3,030,041	+		MIT1002_02728	0.38	+1.1
3,030,209	+		MIT1002_02728	0.69	+1.4
3,030,211	+		MIT1002_02728	0.69	+1.6
3,030,239	-		MIT1002_02728	0.75	-1.3
3,030,240	-		MIT1002_02728	0.75	-0.8
3,030,246	+		MIT1002_02728	0.76	-0.4
3,030,312	+		MIT1002_02728	0.88	-0.3
3,030,368	-				+1.9
3,030,368	-				-0.6
3,030,378	-				+1.0