Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02595

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
2,895,005	+		MIT1002_02593	0.82	-0.5
2,895,010	+		MIT1002_02593	0.82	-0.4
2,895,013	-		MIT1002_02593	0.82	-0.9
2,895,025	+		MIT1002_02593	0.83	+1.1
2,895,028	-		MIT1002_02593	0.83	-0.5
2,895,045	+		MIT1002_02593	0.84	-0.8
2,895,053	-		MIT1002_02593	0.84	-1.2
2,895,082	-		MIT1002_02593	0.86	+0.3
2,895,121	+		MIT1002_02593	0.88	+0.9
2,895,252	+				+0.1
2,895,325	+				+1.6
2,895,358	+				-1.1
2,895,360	+				+1.5
2,895,367	-				-0.4
2,895,386	-				-0.4
2,895,433	-				+0.9
2,895,461	+				+1.3
2,895,625	-				+0.0
2,895,632	+				-0.6
2,895,640	-		MIT1002_02594	0.12	-0.5
2,895,646	-		MIT1002_02594	0.15	+1.8
2,895,656	-		MIT1002_02594	0.19	-1.8
2,895,706	-		MIT1002_02594	0.40	-0.3
2,895,769	+		MIT1002_02594	0.66	-0.4
2,895,785	+		MIT1002_02594	0.72	+4.0
2,895,795	-		MIT1002_02594	0.77	-0.9
2,895,815	+		MIT1002_02594	0.85	-1.0
2,895,840	+				-0.3
2,895,848	-				-0.1
2,895,882	+				-0.4
2,895,961	+				-0.7
2,896,046	-				+1.1
2,896,241	-		MIT1002_02595	0.26	-1.1
2,896,350	+		MIT1002_02595	0.37	-0.1
2,896,351	+		MIT1002_02595	0.37	-0.9
2,896,404	+		MIT1002_02595	0.43	-0.7
2,896,404	+		MIT1002_02595	0.43	-2.1
2,896,412	+		MIT1002_02595	0.44	-0.2
2,896,412	-		MIT1002_02595	0.44	-0.1
2,896,414	+		MIT1002_02595	0.44	+0.2
2,896,414	+		MIT1002_02595	0.44	-0.6
2,896,422	-		MIT1002_02595	0.45	+0.3
2,896,422	-		MIT1002_02595	0.45	-1.3
2,896,476	+		MIT1002_02595	0.50	-1.1
2,896,586	+		MIT1002_02595	0.62	-1.2
2,896,640	+		MIT1002_02595	0.67	+1.2
2,896,648	-		MIT1002_02595	0.68	-1.0
2,896,699	-		MIT1002_02595	0.73	-0.2
2,896,726	+		MIT1002_02595	0.76	+1.6
2,896,804	+		MIT1002_02595	0.84	+1.0
2,896,804	+		MIT1002_02595	0.84	-0.1
2,896,811	+		MIT1002_02595	0.85	+0.6
2,896,819	-		MIT1002_02595	0.86	-0.4
2,896,819	-		MIT1002_02595	0.86	-0.0
2,896,819	-		MIT1002_02595	0.86	-0.2
2,896,819	-		MIT1002_02595	0.86	+0.6
2,896,839	+		MIT1002_02595	0.88	-0.4
2,896,839	+		MIT1002_02595	0.88	-0.0
2,896,862	-				+1.8
2,896,875	-				+1.3
2,896,972	+				-0.8
2,896,976	+				+2.7
2,897,073	+		MIT1002_02596	0.12	+0.2
2,897,073	+		MIT1002_02596	0.12	-0.8
2,897,073	+		MIT1002_02596	0.12	-2.8
2,897,132	+		MIT1002_02596	0.30	+0.7
2,897,149	-		MIT1002_02596	0.35	+0.2
2,897,202	+		MIT1002_02596	0.51	+0.7
2,897,280	+		MIT1002_02596	0.74	-3.2
2,897,280	+		MIT1002_02596	0.74	-0.5
2,897,280	+		MIT1002_02596	0.74	+0.8
2,897,288	-		MIT1002_02596	0.77	+1.1
2,897,297	+		MIT1002_02596	0.80	-0.1
2,897,303	-		MIT1002_02596	0.81	-0.2
2,897,310	+		MIT1002_02596	0.83	+0.4
2,897,310	+		MIT1002_02596	0.83	-0.7
2,897,310	+		MIT1002_02596	0.83	-0.5
2,897,310	+		MIT1002_02596	0.83	-0.2
2,897,310	+		MIT1002_02596	0.83	+1.5
2,897,315	+		MIT1002_02596	0.85	-0.9
2,897,378	+				+0.9
2,897,430	-				+1.0
2,897,466	-				+0.1
2,897,613	-		MIT1002_02597	0.16	-0.1
2,897,631	+		MIT1002_02597	0.18	+0.1
2,897,631	+		MIT1002_02597	0.18	-0.7
2,897,631	+		MIT1002_02597	0.18	-4.3
2,897,631	+		MIT1002_02597	0.18	-0.3
2,897,639	-		MIT1002_02597	0.19	+0.2
2,897,659	+		MIT1002_02597	0.21	-0.2
2,897,720	+		MIT1002_02597	0.27	-1.0
2,897,821	-		MIT1002_02597	0.38	+0.6
2,897,911	-		MIT1002_02597	0.48	+1.8