Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02492

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
2,779,967	-				-4.0
2,780,020	+				-0.4
2,780,020	+				-0.0
2,780,158	-				+0.1
2,780,186	+				+1.0
2,780,194	-				+0.3
2,780,208	-				-0.0
2,780,240	+				-0.0
2,780,248	-				-0.8
2,780,394	+				+0.4
2,780,396	-				+0.2
2,780,448	-		MIT1002_02492	0.15	+0.4
2,780,448	-		MIT1002_02492	0.15	-0.2
2,780,448	-		MIT1002_02492	0.15	-0.3
2,780,541	+		MIT1002_02492	0.26	+0.1
2,780,615	+		MIT1002_02492	0.34	+1.3
2,780,615	+		MIT1002_02492	0.34	+0.6
2,780,652	-		MIT1002_02492	0.39	-1.4
2,780,686	-		MIT1002_02492	0.43	+0.7
2,780,707	-		MIT1002_02492	0.45	-0.1
2,780,709	+		MIT1002_02492	0.46	+0.5
2,780,717	-		MIT1002_02492	0.47	-0.2
2,780,739	-		MIT1002_02492	0.49	+0.6
2,780,742	-		MIT1002_02492	0.50	+1.1
2,780,746	+		MIT1002_02492	0.50	+0.9
2,780,831	-		MIT1002_02492	0.60	+1.3
2,780,831	-		MIT1002_02492	0.60	+1.0
2,780,923	+		MIT1002_02492	0.71	+1.4
2,780,966	+		MIT1002_02492	0.76	+0.4
2,780,966	+		MIT1002_02492	0.76	-0.1
2,781,001	-		MIT1002_02492	0.80	-0.0
2,781,006	-		MIT1002_02492	0.81	-0.7
2,781,048	+		MIT1002_02492	0.86	+1.4
2,781,133	+				-1.3
2,781,141	+				+0.6
2,781,141	-				-0.2
2,781,187	-				+0.3
2,781,194	-				+1.1
2,781,194	-				+0.5
2,781,200	+				-1.5
2,781,210	+				-0.7
2,781,277	+				-0.0
2,781,285	-				-1.1
2,781,310	-				-0.5
2,781,310	-				-0.0
2,781,322	+				-0.4
2,781,381	+				-1.3
2,781,387	-				-0.4
2,781,448	+		MIT1002_02493	0.11	+0.9
2,781,471	+		MIT1002_02493	0.14	+0.2
2,781,493	-		MIT1002_02493	0.16	-2.0
2,781,493	-		MIT1002_02493	0.16	-0.4
2,781,512	+		MIT1002_02493	0.19	-0.5
2,781,609	+		MIT1002_02493	0.30	-0.4
2,781,617	-		MIT1002_02493	0.31	+1.1
2,781,655	+		MIT1002_02493	0.35	-0.0
2,781,713	+		MIT1002_02493	0.42	-0.8
2,781,846	+		MIT1002_02493	0.58	+0.8
2,781,854	-		MIT1002_02493	0.59	+2.2
2,781,862	-		MIT1002_02493	0.59	+0.3
2,781,983	+		MIT1002_02493	0.74	-0.0
2,781,988	-		MIT1002_02493	0.74	-0.2
2,782,031	-		MIT1002_02493	0.79	+1.2
2,782,100	+		MIT1002_02493	0.87	+0.6
2,782,148	-				-0.3