Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02438

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
2,720,703	-		MIT1002_02436	0.39	+1.4
2,720,735	-		MIT1002_02436	0.42	+2.1
2,720,864	+		MIT1002_02436	0.54	-0.1
2,720,865	-		MIT1002_02436	0.54	-0.7
2,720,886	+		MIT1002_02436	0.56	-1.5
2,720,904	+		MIT1002_02436	0.58	-0.9
2,720,912	-		MIT1002_02436	0.59	+0.4
2,720,912	-		MIT1002_02436	0.59	-0.9
2,720,912	-		MIT1002_02436	0.59	+0.6
2,720,932	-		MIT1002_02436	0.61	+0.7
2,720,945	+		MIT1002_02436	0.62	-0.1
2,720,988	-		MIT1002_02436	0.66	+1.4
2,720,999	-		MIT1002_02436	0.67	+0.1
2,721,018	+		MIT1002_02436	0.69	-2.0
2,721,018	+		MIT1002_02436	0.69	+0.7
2,721,038	-		MIT1002_02436	0.71	+0.5
2,721,094	-		MIT1002_02436	0.77	+0.1
2,721,094	-		MIT1002_02436	0.77	+3.3
2,721,118	+		MIT1002_02436	0.79	+0.8
2,721,154	+		MIT1002_02436	0.82	+0.3
2,721,179	+		MIT1002_02436	0.85	+0.6
2,721,180	+		MIT1002_02436	0.85	+1.0
2,721,187	-		MIT1002_02436	0.86	-0.9
2,721,187	-		MIT1002_02436	0.86	-0.2
2,721,200	+		MIT1002_02436	0.87	-1.0
2,721,200	+		MIT1002_02436	0.87	-0.1
2,721,208	-		MIT1002_02436	0.88	-0.2
2,721,210	-		MIT1002_02436	0.88	+2.0
2,721,210	-		MIT1002_02436	0.88	+0.7
2,721,228	-		MIT1002_02436	0.90	+0.6
2,721,230	+		MIT1002_02436	0.90	-1.0
2,721,275	+				+2.0
2,721,290	+				+0.0
2,721,382	-				-0.7
2,721,478	+				+1.8
2,721,547	-		MIT1002_02437	0.39	-0.5
2,721,566	-		MIT1002_02437	0.49	-0.3
2,721,566	-		MIT1002_02437	0.49	+0.0
2,721,578	-		MIT1002_02437	0.54	-0.4
2,721,621	+		MIT1002_02437	0.75	+0.1
2,721,629	-		MIT1002_02437	0.79	+0.6
2,721,634	-		MIT1002_02437	0.82	-0.0
2,721,681	+				+0.1
2,721,695	+				+1.1
2,721,710	-		MIT1002_02438	0.15	+1.5
2,721,741	+		MIT1002_02438	0.29	-1.7
2,721,767	-		MIT1002_02438	0.41	+0.1
2,721,893	-				+1.1
2,722,003	+				-1.7
2,722,162	+		MIT1002_02439	0.40	-1.4
2,722,171	+		MIT1002_02439	0.42	-0.7
2,722,174	-		MIT1002_02439	0.43	+0.2
2,722,311	+		MIT1002_02439	0.75	+0.7
2,722,417	-				+0.1
2,722,424	+				-0.2
2,722,436	+				-0.2
2,722,458	+				-0.5
2,722,458	+				-0.5
2,722,466	-				+0.6
2,722,494	+				+1.1
2,722,513	-				+0.3
2,722,538	+		MIT1002_02440	0.12	+1.0
2,722,609	+		MIT1002_02440	0.21	+0.4
2,722,609	+		MIT1002_02440	0.21	-1.4
2,722,672	+		MIT1002_02440	0.28	+0.8
2,722,677	+		MIT1002_02440	0.29	+0.2
2,722,710	+		MIT1002_02440	0.33	-0.2
2,722,728	-		MIT1002_02440	0.35	+1.5
2,722,728	-		MIT1002_02440	0.35	-1.7
2,722,728	-		MIT1002_02440	0.35	+2.1
2,722,733	+		MIT1002_02440	0.36	+0.6
2,722,733	+		MIT1002_02440	0.36	+0.3
2,722,767	+		MIT1002_02440	0.40	-0.4
2,722,775	-		MIT1002_02440	0.41	+0.9
2,722,775	-		MIT1002_02440	0.41	+1.1
2,722,780	-		MIT1002_02440	0.42	-0.2
2,722,856	+		MIT1002_02440	0.52	-1.0
2,722,864	-		MIT1002_02440	0.53	-3.0
2,722,874	+		MIT1002_02440	0.54	+1.3
2,722,874	+		MIT1002_02440	0.54	-0.9
2,722,876	+		MIT1002_02440	0.54	+0.4