Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02296

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
2,559,335	-				+1.3
2,559,340	-				-0.2
2,559,413	-		MIT1002_02296	0.14	-1.5
2,559,414	+		MIT1002_02296	0.14	-0.7
2,559,422	-		MIT1002_02296	0.15	-0.4
2,559,422	-		MIT1002_02296	0.15	+0.4
2,559,422	-		MIT1002_02296	0.15	-1.0
2,559,422	-		MIT1002_02296	0.15	-0.9
2,559,422	-		MIT1002_02296	0.15	+0.2
2,559,422	-		MIT1002_02296	0.15	-0.2
2,559,567	+		MIT1002_02296	0.31	-1.1
2,559,567	+		MIT1002_02296	0.31	-1.0
2,559,567	+		MIT1002_02296	0.31	+1.0
2,559,576	-		MIT1002_02296	0.32	-0.1
2,559,638	-		MIT1002_02296	0.38	-0.8
2,559,678	-		MIT1002_02296	0.42	-0.4
2,559,698	-		MIT1002_02296	0.44	-0.1
2,559,830	-		MIT1002_02296	0.58	+0.5
2,559,957	+		MIT1002_02296	0.72	-0.1
2,559,986	-		MIT1002_02296	0.75	-0.5
2,560,059	+		MIT1002_02296	0.82	-1.7
2,560,107	+		MIT1002_02296	0.88	-1.2
2,560,187	+				-2.9
2,560,195	-				-1.0
2,560,219	-				+0.3
2,560,321	-		MIT1002_02297	0.13	+0.3
2,560,404	-		MIT1002_02297	0.25	-0.2
2,560,449	+		MIT1002_02297	0.31	-1.2
2,560,455	-		MIT1002_02297	0.32	-0.5
2,560,470	-		MIT1002_02297	0.34	+0.3
2,560,562	+		MIT1002_02297	0.46	-0.9
2,560,617	-		MIT1002_02297	0.53	+0.1
2,560,690	+		MIT1002_02297	0.63	+1.0
2,560,728	+		MIT1002_02297	0.68	-0.4
2,560,732	+		MIT1002_02297	0.69	-0.0
2,560,736	-		MIT1002_02297	0.70	-0.5
2,560,736	-		MIT1002_02297	0.70	-0.8
2,560,737	-		MIT1002_02297	0.70	-1.0
2,560,797	-		MIT1002_02297	0.78	-1.0
2,560,798	-		MIT1002_02297	0.78	-0.5
2,560,798	-		MIT1002_02297	0.78	-0.8
2,560,878	+		MIT1002_02297	0.89	-0.4
2,561,030	-				-0.2
2,561,032	+				+0.0
2,561,037	+				-1.3
2,561,052	-				+0.4
2,561,053	-				+2.3
2,561,064	-				+0.9
2,561,064	-				-1.0