Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01917

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
2,123,960	+		MIT1002_01915	0.53	-0.3
2,123,960	+		MIT1002_01915	0.53	+0.3
2,123,960	+		MIT1002_01915	0.53	+0.0
2,123,960	+		MIT1002_01915	0.53	+0.6
2,123,960	+		MIT1002_01915	0.53	+0.9
2,123,960	+		MIT1002_01915	0.53	+0.4
2,123,960	+		MIT1002_01915	0.53	-1.0
2,123,968	-		MIT1002_01915	0.54	+0.6
2,123,988	+		MIT1002_01915	0.57	+0.5
2,123,988	+		MIT1002_01915	0.57	-1.3
2,124,017	+		MIT1002_01915	0.61	+1.3
2,124,042	-		MIT1002_01915	0.65	-0.4
2,124,054	+		MIT1002_01915	0.67	+1.3
2,124,062	-		MIT1002_01915	0.68	-0.7
2,124,073	+		MIT1002_01915	0.69	-0.4
2,124,145	+		MIT1002_01915	0.80	-2.0
2,124,146	-		MIT1002_01915	0.80	+0.5
2,124,167	+		MIT1002_01915	0.83	-0.5
2,124,232	+				-0.1
2,124,290	+				+0.6
2,124,298	-				-0.2
2,124,323	+				-0.6
2,124,323	+				-0.5
2,124,364	+		MIT1002_01916	0.12	+0.4
2,124,464	-		MIT1002_01916	0.28	+0.3
2,124,510	-		MIT1002_01916	0.36	+0.7
2,124,511	-		MIT1002_01916	0.36	+0.7
2,124,511	-		MIT1002_01916	0.36	+0.4
2,124,556	-		MIT1002_01916	0.43	+0.2
2,124,570	+		MIT1002_01916	0.46	+1.3
2,124,677	+		MIT1002_01916	0.64	-3.4
2,124,677	+		MIT1002_01916	0.64	+0.4
2,124,685	-		MIT1002_01916	0.65	-0.6
2,124,685	-		MIT1002_01916	0.65	+1.1
2,124,685	-		MIT1002_01916	0.65	-1.4
2,124,733	+		MIT1002_01916	0.73	+1.2
2,124,740	+		MIT1002_01916	0.74	+0.7
2,124,741	-		MIT1002_01916	0.74	+1.3
2,124,749	-		MIT1002_01916	0.75	-1.0
2,124,779	+		MIT1002_01916	0.80	+0.1
2,124,787	-		MIT1002_01916	0.82	-0.2
2,124,919	+				-2.2
2,125,174	+		MIT1002_01917	0.41	-3.8
2,125,200	+		MIT1002_01917	0.45	-2.2
2,125,273	-		MIT1002_01917	0.56	-2.3
2,125,350	+		MIT1002_01917	0.67	-3.5
2,125,350	+		MIT1002_01917	0.67	-2.5
2,125,358	-		MIT1002_01917	0.69	-3.0
2,125,519	+				-3.2
2,125,521	+				-2.2
2,125,681	+				-0.9
2,125,759	-		MIT1002_01918	0.24	-1.0
2,125,823	+		MIT1002_01918	0.40	-1.0
2,125,842	-		MIT1002_01918	0.44	-1.2
2,125,880	+		MIT1002_01918	0.54	-0.0
2,125,958	+		MIT1002_01918	0.73	-0.2
2,126,085	-				-0.7
2,126,163	-				-0.2
2,126,163	-				+0.4
2,126,193	+				+0.8
2,126,338	-		MIT1002_01919	0.15	+1.1
2,126,367	+		MIT1002_01919	0.18	+1.2
2,126,372	+		MIT1002_01919	0.19	+0.7
2,126,375	-		MIT1002_01919	0.19	-0.5
2,126,385	-		MIT1002_01919	0.20	+1.2
2,126,396	+		MIT1002_01919	0.21	-0.9
2,126,396	+		MIT1002_01919	0.21	+0.7
2,126,411	+		MIT1002_01919	0.23	+0.1
2,126,453	-		MIT1002_01919	0.28	+0.6
2,126,463	-		MIT1002_01919	0.29	+0.1
2,126,487	-		MIT1002_01919	0.31	+0.6
2,126,531	+		MIT1002_01919	0.36	+0.3
2,126,566	+		MIT1002_01919	0.40	+0.3