Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01683

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
1,867,208	-				+1.6
1,867,215	-				-0.2
1,867,215	-				+0.6
1,867,242	+				-0.4
1,867,354	-		MIT1002_01682	0.19	-0.5
1,867,445	-		MIT1002_01682	0.29	-2.6
1,867,483	-		MIT1002_01682	0.33	-2.7
1,867,505	+		MIT1002_01682	0.35	-0.0
1,867,539	+		MIT1002_01682	0.39	-0.5
1,867,539	+		MIT1002_01682	0.39	+0.7
1,867,539	+		MIT1002_01682	0.39	-0.2
1,867,552	+		MIT1002_01682	0.40	+1.4
1,867,595	+		MIT1002_01682	0.45	+1.1
1,867,629	+		MIT1002_01682	0.48	+1.1
1,867,636	+		MIT1002_01682	0.49	-0.3
1,867,807	+		MIT1002_01682	0.67	-1.3
1,867,819	+		MIT1002_01682	0.68	+0.0
1,867,826	+		MIT1002_01682	0.69	+0.9
1,867,875	+		MIT1002_01682	0.74	-0.2
1,867,942	-		MIT1002_01682	0.81	+1.8
1,867,942	-		MIT1002_01682	0.81	-1.7
1,867,971	-		MIT1002_01682	0.84	+0.3
1,867,971	-		MIT1002_01682	0.84	-0.1
1,868,005	+		MIT1002_01682	0.88	-1.9
1,868,047	+				-0.8
1,868,055	+				+0.2
1,868,067	+				+0.7
1,868,067	+				-0.3
1,868,067	+				+1.1
1,868,067	+				-1.7
1,868,075	-				+0.9
1,868,075	-				-0.8
1,868,075	-				+1.3
1,868,075	-				-1.0
1,868,090	-				+0.4
1,868,098	+				+1.1
1,868,111	-				-0.1
1,868,210	+				-0.0
1,868,218	-				-0.3
1,868,218	-				-0.1
1,868,226	+				+0.4
1,868,281	-				+1.4
1,868,355	+		MIT1002_01683	0.12	+1.1
1,868,363	-		MIT1002_01683	0.12	+0.5
1,868,378	-		MIT1002_01683	0.13	-0.5
1,868,380	+		MIT1002_01683	0.14	-0.9
1,868,483	-		MIT1002_01683	0.22	-0.6
1,868,488	+		MIT1002_01683	0.22	+0.2
1,868,546	+		MIT1002_01683	0.27	-0.1
1,868,564	-		MIT1002_01683	0.28	+1.0
1,868,573	+		MIT1002_01683	0.29	+0.1
1,868,581	-		MIT1002_01683	0.29	-1.4
1,868,583	-		MIT1002_01683	0.30	+0.5
1,868,703	+		MIT1002_01683	0.39	+1.3
1,868,737	-		MIT1002_01683	0.42	-0.1
1,868,751	+		MIT1002_01683	0.43	+0.2
1,868,756	+		MIT1002_01683	0.43	-0.7
1,868,759	-		MIT1002_01683	0.43	+0.9
1,868,825	+		MIT1002_01683	0.49	+0.2
1,868,826	-		MIT1002_01683	0.49	+0.8
1,868,832	+		MIT1002_01683	0.49	+0.2
1,868,840	-		MIT1002_01683	0.50	+1.3
1,868,840	-		MIT1002_01683	0.50	+0.6
1,868,877	+		MIT1002_01683	0.53	+0.7
1,868,982	-		MIT1002_01683	0.61	+0.8
1,869,044	+		MIT1002_01683	0.66	+1.1
1,869,052	-		MIT1002_01683	0.66	+1.9
1,869,072	+		MIT1002_01683	0.68	-0.4
1,869,107	+		MIT1002_01683	0.71	-3.2
1,869,194	-		MIT1002_01683	0.78	+1.8
1,869,203	+		MIT1002_01683	0.78	+0.2
1,869,205	+		MIT1002_01683	0.78	+1.4
1,869,235	+		MIT1002_01683	0.81	+0.3
1,869,235	+		MIT1002_01683	0.81	-0.4
1,869,243	-		MIT1002_01683	0.81	-1.8
1,869,243	-		MIT1002_01683	0.81	+0.7
1,869,252	+		MIT1002_01683	0.82	+0.1
1,869,260	-		MIT1002_01683	0.83	-0.2
1,869,276	-		MIT1002_01683	0.84	+0.3
1,869,300	+		MIT1002_01683	0.86	-0.2
1,869,329	+		MIT1002_01683	0.88	+0.5
1,869,345	-		MIT1002_01683	0.89	+0.3
1,869,449	+				-0.5
1,869,456	+				+0.6
1,869,510	-				-2.4
1,869,523	-				+0.7
1,869,527	+				+0.7
1,869,606	-				-0.3
1,869,620	-				-2.8
1,869,657	-				-2.3
1,869,657	-				+0.2
1,869,657	-				-0.7
1,869,657	-				-1.1
1,869,659	+				+1.6
1,869,659	+				+0.6
1,869,659	+				+0.8
1,869,667	-				+0.5
1,869,667	-				-0.4
1,869,667	-				-0.0
1,869,751	-				-0.1
1,869,751	-				+0.1
1,869,751	-				-0.3
1,869,751	-				-0.9
1,869,821	+				-0.6
1,869,829	-				+0.1
1,870,021	+		MIT1002_01684	0.11	-1.3
1,870,021	+		MIT1002_01684	0.11	+0.4
1,870,034	-		MIT1002_01684	0.12	-0.3
1,870,037	+		MIT1002_01684	0.12	-0.1
1,870,039	+		MIT1002_01684	0.13	+0.4
1,870,176	-		MIT1002_01684	0.23	-1.6
1,870,328	-		MIT1002_01684	0.34	-1.9
1,870,339	+		MIT1002_01684	0.35	-1.6
1,870,339	+		MIT1002_01684	0.35	-1.3
1,870,346	-		MIT1002_01684	0.35	+1.2
1,870,347	-		MIT1002_01684	0.35	-0.2
1,870,352	-		MIT1002_01684	0.36	+1.2
1,870,367	+		MIT1002_01684	0.37	-0.5
1,870,367	+		MIT1002_01684	0.37	+0.5
1,870,375	-		MIT1002_01684	0.37	+0.7
1,870,375	-		MIT1002_01684	0.37	-0.3
1,870,377	-		MIT1002_01684	0.38	-1.5
1,870,438	+		MIT1002_01684	0.42	+0.0
1,870,469	+		MIT1002_01684	0.44	-0.1