Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01515

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
1,665,372	+				+0.6
1,665,460	-				-1.2
1,665,475	+				-3.0
1,665,497	+				-0.7
1,665,515	+		MIT1002_01515	0.12	-2.1
1,665,595	+		MIT1002_01515	0.22	-1.9
1,665,597	+		MIT1002_01515	0.22	-0.8
1,665,613	-		MIT1002_01515	0.24	-1.8
1,665,725	-		MIT1002_01515	0.37	-3.2
1,665,735	+		MIT1002_01515	0.38	-2.6
1,665,749	+		MIT1002_01515	0.40	-2.1
1,665,890	+		MIT1002_01515	0.57	-0.3
1,665,933	-		MIT1002_01515	0.62	-2.2
1,666,000	+		MIT1002_01515	0.70	-1.7
1,666,038	+		MIT1002_01515	0.74	-0.6
1,666,138	+		MIT1002_01515	0.86	-1.0
1,666,138	+		MIT1002_01515	0.86	-0.5
1,666,146	-		MIT1002_01515	0.87	-1.8
1,666,217	-				+0.7
1,666,228	+				-0.7
1,666,234	+				-1.7
1,666,234	+				+0.1
1,666,242	-				-0.4
1,666,391	+				-0.7
1,666,476	+				+0.6
1,666,511	-				-1.4
1,666,574	+		MIT1002_01516	0.11	-0.2
1,666,582	-		MIT1002_01516	0.11	-0.2
1,666,629	+		MIT1002_01516	0.14	+0.5
1,666,707	+		MIT1002_01516	0.19	+0.3
1,666,848	-		MIT1002_01516	0.28	+0.7
1,666,986	+		MIT1002_01516	0.37	-0.9
1,666,986	+		MIT1002_01516	0.37	-2.0
1,666,986	+		MIT1002_01516	0.37	-0.5
1,666,986	+		MIT1002_01516	0.37	-0.1
1,666,994	-		MIT1002_01516	0.38	-0.5
1,666,994	-		MIT1002_01516	0.38	-0.4
1,666,994	-		MIT1002_01516	0.38	-0.1
1,666,994	-		MIT1002_01516	0.38	+0.2
1,666,994	-		MIT1002_01516	0.38	+0.0
1,666,994	-		MIT1002_01516	0.38	+0.3
1,666,994	-		MIT1002_01516	0.38	-0.3
1,666,996	+		MIT1002_01516	0.38	+0.1
1,666,996	+		MIT1002_01516	0.38	+0.4
1,667,004	-		MIT1002_01516	0.38	-0.3
1,667,023	-		MIT1002_01516	0.39	+0.9
1,667,085	+		MIT1002_01516	0.43	-0.3
1,667,109	+		MIT1002_01516	0.45	+0.8
1,667,109	+		MIT1002_01516	0.45	+0.6
1,667,161	+		MIT1002_01516	0.48	+1.3
1,667,161	+		MIT1002_01516	0.48	-0.2
1,667,169	-		MIT1002_01516	0.49	-0.6
1,667,171	+		MIT1002_01516	0.49	-0.5
1,667,247	-		MIT1002_01516	0.54	+0.5