Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01467

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
1,621,272	+		MIT1002_01466	0.22	-3.0
1,621,280	-		MIT1002_01466	0.23	-4.1
1,621,359	+		MIT1002_01466	0.29	-3.2
1,621,493	+		MIT1002_01466	0.40	-3.7
1,621,579	+		MIT1002_01466	0.47	-6.2
1,621,612	+		MIT1002_01466	0.49	-3.7
1,621,638	+		MIT1002_01466	0.51	-2.6
1,621,661	+		MIT1002_01466	0.53	-3.8
1,621,669	-		MIT1002_01466	0.54	-2.8
1,621,672	+		MIT1002_01466	0.54	-4.6
1,621,766	+		MIT1002_01466	0.61	-3.8
1,621,773	-		MIT1002_01466	0.62	-1.8
1,621,805	-		MIT1002_01466	0.64	-3.0
1,621,846	+		MIT1002_01466	0.68	-4.3
1,621,854	-		MIT1002_01466	0.68	-3.2
1,621,854	-		MIT1002_01466	0.68	-4.7
1,621,905	+		MIT1002_01466	0.72	-4.6
1,621,916	-		MIT1002_01466	0.73	-5.2
1,622,021	+		MIT1002_01466	0.81	-3.7
1,622,025	+		MIT1002_01466	0.82	-4.2
1,622,174	+				-4.7
1,622,182	-				-2.1
1,622,315	+				-5.8
1,622,320	+				-3.5
1,622,419	-				-3.3
1,622,561	-				-2.4
1,622,567	-				-4.8
1,622,611	-		MIT1002_01467	0.11	-6.7
1,622,738	+		MIT1002_01467	0.15	-4.5
1,622,748	-		MIT1002_01467	0.15	-2.5
1,622,790	+		MIT1002_01467	0.16	-1.8
1,622,903	+		MIT1002_01467	0.20	-6.5
1,622,995	+		MIT1002_01467	0.23	-3.3
1,623,006	+		MIT1002_01467	0.23	-3.5
1,623,009	+		MIT1002_01467	0.23	-2.6
1,623,020	+		MIT1002_01467	0.23	-0.6
1,623,074	+		MIT1002_01467	0.25	-2.7
1,623,082	-		MIT1002_01467	0.25	-3.3
1,623,084	-		MIT1002_01467	0.25	-2.3
1,623,123	+		MIT1002_01467	0.27	-4.3
1,623,123	+		MIT1002_01467	0.27	-3.6
1,623,123	+		MIT1002_01467	0.27	-3.7
1,623,252	+		MIT1002_01467	0.31	-3.2
1,623,254	+		MIT1002_01467	0.31	-3.7
1,623,260	-		MIT1002_01467	0.31	-4.0
1,623,336	+		MIT1002_01467	0.33	-3.1
1,623,402	-		MIT1002_01467	0.35	-6.7
1,623,497	+		MIT1002_01467	0.38	-5.1
1,623,498	-		MIT1002_01467	0.38	-4.7
1,623,512	-		MIT1002_01467	0.39	-4.2
1,623,560	+		MIT1002_01467	0.40	-5.7
1,623,619	-		MIT1002_01467	0.42	-4.3
1,623,631	-		MIT1002_01467	0.42	-2.0
1,623,661	-		MIT1002_01467	0.43	-5.1
1,623,708	-		MIT1002_01467	0.45	-6.6
1,623,727	+		MIT1002_01467	0.45	-4.0
1,623,849	-		MIT1002_01467	0.49	-2.8
1,623,897	-		MIT1002_01467	0.51	-9.6
1,623,897	-		MIT1002_01467	0.51	-4.7
1,623,918	+		MIT1002_01467	0.51	-2.6
1,623,918	+		MIT1002_01467	0.51	-4.8
1,623,918	+		MIT1002_01467	0.51	-6.0
1,623,926	-		MIT1002_01467	0.51	-2.5
1,623,926	-		MIT1002_01467	0.51	-3.9
1,623,948	+		MIT1002_01467	0.52	-3.7
1,624,048	-		MIT1002_01467	0.55	-4.0
1,624,065	+		MIT1002_01467	0.56	-4.6
1,624,065	+		MIT1002_01467	0.56	-4.5
1,624,065	+		MIT1002_01467	0.56	-3.2
1,624,081	+		MIT1002_01467	0.56	-1.2
1,624,103	-		MIT1002_01467	0.57	-3.8
1,624,175	-		MIT1002_01467	0.59	-2.8
1,624,188	+		MIT1002_01467	0.60	-1.0
1,624,314	-		MIT1002_01467	0.63	-3.5
1,624,363	-		MIT1002_01467	0.65	-6.6
1,624,483	-		MIT1002_01467	0.69	-3.6
1,624,487	+		MIT1002_01467	0.69	-0.6
1,624,497	+		MIT1002_01467	0.69	-3.0
1,624,582	-		MIT1002_01467	0.72	-2.6
1,624,615	-		MIT1002_01467	0.73	-1.2
1,624,624	-		MIT1002_01467	0.73	-7.4
1,624,629	+		MIT1002_01467	0.73	-1.2
1,624,654	-		MIT1002_01467	0.74	-3.3
1,624,701	+		MIT1002_01467	0.75	-3.6
1,624,738	-		MIT1002_01467	0.77	-4.8
1,624,787	+		MIT1002_01467	0.78	-3.5
1,624,795	-		MIT1002_01467	0.78	-1.8
1,624,795	-		MIT1002_01467	0.78	-2.1
1,624,795	-		MIT1002_01467	0.78	-1.4
1,624,802	-		MIT1002_01467	0.79	-4.0
1,624,904	-		MIT1002_01467	0.82	-4.7
1,624,921	+		MIT1002_01467	0.82	-3.3
1,624,931	-		MIT1002_01467	0.83	-3.3
1,624,962	+		MIT1002_01467	0.84	-4.0
1,624,970	+		MIT1002_01467	0.84	-3.9
1,624,978	-		MIT1002_01467	0.84	-2.6
1,624,988	+		MIT1002_01467	0.84	-3.0
1,624,989	-		MIT1002_01467	0.84	-3.6
1,625,014	+		MIT1002_01467	0.85	-3.3
1,625,026	+		MIT1002_01467	0.86	-3.5
1,625,043	+		MIT1002_01467	0.86	-0.6
1,625,344	+				-5.0
1,625,344	+				-3.3
1,625,344	+				-4.2
1,625,344	+				-2.1
1,625,344	+				-4.4
1,625,352	-				-4.9
1,625,375	+				-1.8
1,625,383	-				-3.2
1,625,406	+				-5.1
1,625,467	+				-1.0
1,625,509	+				+0.7
1,625,510	+				-0.0
1,625,612	-				+0.1
1,625,724	-		MIT1002_01468	0.24	+0.0
1,625,748	+		MIT1002_01468	0.29	-0.5
1,625,800	+		MIT1002_01468	0.40	-0.5
1,625,878	+		MIT1002_01468	0.57	-1.7
1,626,092	+				-0.4
1,626,100	-				-0.0
1,626,108	-				+0.4
1,626,114	+				+0.5
1,626,208	+				+1.1
1,626,213	+				+1.3
1,626,213	+				+0.3
1,626,342	+				-0.4
1,626,352	+				-0.2
1,626,368	-				+1.2
1,626,374	+				-0.7
1,626,379	+				+0.6
1,626,444	+				-1.6
1,626,450	+				-0.1
1,626,451	+				-0.2
1,626,459	-				-0.2
1,626,486	-		MIT1002_01469	0.10	-0.6