Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01431

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
1,575,022	-		MIT1002_01430	0.66	-2.5
1,575,064	-		MIT1002_01430	0.68	-2.9
1,575,140	+		MIT1002_01430	0.73	-3.0
1,575,427	+		MIT1002_01430	0.89	-4.7
1,575,427	+		MIT1002_01430	0.89	-2.7
1,575,427	+		MIT1002_01430	0.89	-1.8
1,575,544	+				-3.8
1,575,573	+				-2.1
1,575,579	+				-1.6
1,575,596	+				-2.9
1,575,701	-				-1.2
1,575,701	-				-1.4
1,575,703	-				-0.6
1,575,722	-				-0.2
1,575,724	-				-3.1
1,575,763	-				+1.9
1,575,912	-				+0.3
1,575,953	+				-0.6
1,575,953	+				-0.9
1,575,953	+				+0.5
1,576,107	-		MIT1002_01431	0.25	-0.3
1,576,143	-		MIT1002_01431	0.29	-0.3
1,576,282	+		MIT1002_01431	0.45	-2.2
1,576,287	+		MIT1002_01431	0.46	+0.4
1,576,290	-		MIT1002_01431	0.46	-0.4
1,576,351	+		MIT1002_01431	0.53	+0.1
1,576,428	-		MIT1002_01431	0.62	+0.6
1,576,461	+		MIT1002_01431	0.66	-0.8
1,576,464	-		MIT1002_01431	0.66	-1.4
1,576,465	-		MIT1002_01431	0.66	-1.0
1,576,518	+		MIT1002_01431	0.73	-0.7
1,576,526	-		MIT1002_01431	0.74	-0.0
1,576,606	+		MIT1002_01431	0.83	-2.5
1,576,617	-		MIT1002_01431	0.84	-0.2
1,576,662	-		MIT1002_01431	0.89	+0.0
1,576,666	-		MIT1002_01431	0.90	-1.5
1,576,695	+				-2.3
1,576,695	+				+0.2
1,576,696	-				+0.6
1,576,741	+				-1.9
1,576,778	+				+0.9
1,576,778	+				+1.4
1,576,797	+				-0.1
1,576,799	-				+0.4
1,576,814	+				+0.2
1,576,814	+				+0.8
1,576,835	+				-0.3
1,576,885	-				-0.4
1,576,885	-				-1.5
1,576,903	+				-0.9
1,576,911	-				-1.7
1,576,933	-				+1.2
1,576,954	+				+0.4
1,576,962	-				-0.2
1,577,015	+				+0.2
1,577,034	+				+2.2
1,577,071	+		MIT1002_01432	0.13	+0.8
1,577,076	+		MIT1002_01432	0.14	+0.6
1,577,084	-		MIT1002_01432	0.15	+0.5
1,577,092	-		MIT1002_01432	0.16	+0.3
1,577,102	-		MIT1002_01432	0.18	+0.3
1,577,102	-		MIT1002_01432	0.18	+0.7
1,577,147	+		MIT1002_01432	0.25	+0.1
1,577,147	+		MIT1002_01432	0.25	+0.2
1,577,206	+		MIT1002_01432	0.34	-1.5
1,577,224	+		MIT1002_01432	0.37	-1.2
1,577,234	+		MIT1002_01432	0.39	+0.7
1,577,264	+		MIT1002_01432	0.44	+0.4
1,577,269	+		MIT1002_01432	0.45	+0.1
1,577,277	-		MIT1002_01432	0.46	+0.1
1,577,320	-		MIT1002_01432	0.53	+0.5
1,577,379	-		MIT1002_01432	0.62	-1.0
1,577,441	+		MIT1002_01432	0.72	+0.5
1,577,441	+		MIT1002_01432	0.72	+0.9
1,577,531	+		MIT1002_01432	0.87	+0.3
1,577,531	+		MIT1002_01432	0.87	-0.7
1,577,531	+		MIT1002_01432	0.87	+1.0
1,577,531	+		MIT1002_01432	0.87	+0.3
1,577,539	-		MIT1002_01432	0.88	+0.9
1,577,652	-				-2.0
1,577,652	-				+3.2
1,577,658	+				+0.7
1,577,687	+				+0.3
1,577,700	+				-0.3
1,577,714	+				-0.6
1,577,727	+				-1.6
1,577,735	+				+1.6