Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01202

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
1,322,695	+		MIT1002_01201	0.34	+0.9
1,322,771	+		MIT1002_01201	0.41	-1.2
1,322,772	-		MIT1002_01201	0.42	-1.0
1,322,832	-		MIT1002_01201	0.47	-0.2
1,322,840	-		MIT1002_01201	0.48	-0.3
1,322,842	-		MIT1002_01201	0.48	+0.8
1,322,844	-		MIT1002_01201	0.48	-1.3
1,322,846	+		MIT1002_01201	0.49	-1.1
1,322,846	+		MIT1002_01201	0.49	+1.0
1,322,846	+		MIT1002_01201	0.49	-0.3
1,322,846	+		MIT1002_01201	0.49	+0.4
1,322,854	-		MIT1002_01201	0.49	+0.7
1,322,854	-		MIT1002_01201	0.49	-1.4
1,322,854	-		MIT1002_01201	0.49	-1.7
1,322,854	-		MIT1002_01201	0.49	-1.6
1,322,854	-		MIT1002_01201	0.49	-0.1
1,322,854	-		MIT1002_01201	0.49	-4.3
1,322,883	+		MIT1002_01201	0.52	-0.4
1,322,886	-		MIT1002_01201	0.52	-0.6
1,322,893	+		MIT1002_01201	0.53	+0.1
1,322,925	-		MIT1002_01201	0.56	-0.3
1,323,021	+		MIT1002_01201	0.65	-0.8
1,323,126	+		MIT1002_01201	0.75	-0.4
1,323,134	-		MIT1002_01201	0.76	-0.7
1,323,144	-		MIT1002_01201	0.77	-0.5
1,323,144	-		MIT1002_01201	0.77	-1.8
1,323,155	+		MIT1002_01201	0.78	-1.7
1,323,156	+		MIT1002_01201	0.78	-0.7
1,323,166	+		MIT1002_01201	0.79	-1.1
1,323,166	+		MIT1002_01201	0.79	-0.6
1,323,216	-		MIT1002_01201	0.84	+0.4
1,323,226	-		MIT1002_01201	0.85	-0.2
1,323,228	-		MIT1002_01201	0.85	+0.8
1,323,232	+		MIT1002_01201	0.85	-0.1
1,323,232	+		MIT1002_01201	0.85	-0.8
1,323,232	+		MIT1002_01201	0.85	-0.9
1,323,232	+		MIT1002_01201	0.85	+2.0
1,323,232	+		MIT1002_01201	0.85	+0.7
1,323,240	-		MIT1002_01201	0.86	-0.6
1,323,240	-		MIT1002_01201	0.86	+0.4
1,323,257	+		MIT1002_01201	0.88	-0.2
1,323,286	+				-0.9
1,323,301	+				+1.3
1,323,362	-				+1.2
1,323,453	-				-1.4
1,323,582	+				-2.0
1,323,600	+				+0.7
1,323,636	-				+0.6
1,323,636	-				+0.2
1,323,745	+				+1.0
1,323,745	+				+0.0
1,323,745	+				-1.4
1,323,745	+				-0.4
1,323,745	+				-0.5
1,323,745	+				-0.6
1,323,753	-				-3.1
1,323,753	-				+0.8
1,323,816	+		MIT1002_01202	0.11	-1.0
1,323,861	-		MIT1002_01202	0.14	+0.1
1,323,882	-		MIT1002_01202	0.16	-0.3
1,323,955	-		MIT1002_01202	0.22	+0.1
1,323,977	-		MIT1002_01202	0.24	+0.3
1,323,977	-		MIT1002_01202	0.24	+0.2
1,323,985	-		MIT1002_01202	0.24	-1.6
1,324,030	-		MIT1002_01202	0.28	+2.3
1,324,043	-		MIT1002_01202	0.29	-0.4
1,324,062	+		MIT1002_01202	0.31	+0.4
1,324,067	+		MIT1002_01202	0.31	-3.5
1,324,067	+		MIT1002_01202	0.31	+0.6
1,324,067	+		MIT1002_01202	0.31	+2.1
1,324,070	-		MIT1002_01202	0.31	-0.2
1,324,075	-		MIT1002_01202	0.32	-1.6
1,324,075	-		MIT1002_01202	0.32	+0.6
1,324,164	-		MIT1002_01202	0.39	+0.2
1,324,237	+		MIT1002_01202	0.45	+0.5
1,324,283	+		MIT1002_01202	0.49	-1.2
1,324,291	-		MIT1002_01202	0.50	-0.7
1,324,293	+		MIT1002_01202	0.50	-1.6
1,324,318	-		MIT1002_01202	0.52	-1.3
1,324,318	-		MIT1002_01202	0.52	-0.3
1,324,348	-		MIT1002_01202	0.54	+0.2
1,324,365	+		MIT1002_01202	0.56	+1.0
1,324,377	+		MIT1002_01202	0.57	-0.2
1,324,384	+		MIT1002_01202	0.57	+1.6
1,324,385	-		MIT1002_01202	0.57	+0.1
1,324,392	-		MIT1002_01202	0.58	+2.0
1,324,440	-		MIT1002_01202	0.62	-1.8
1,324,644	-		MIT1002_01202	0.79	+1.6
1,324,667	-		MIT1002_01202	0.81	-0.3
1,324,690	-		MIT1002_01202	0.82	-1.1
1,324,848	-				+1.3
1,324,855	+				+0.3
1,324,857	+				+0.7
1,324,940	+				-1.1
1,324,948	-				+0.0
1,324,983	-				+1.0
1,325,018	+				+1.1
1,325,026	-				-0.1
1,325,026	-				+0.2
1,325,144	+				+1.4
1,325,180	+				+0.6
1,325,198	-				+0.6
1,325,198	-				+0.8
1,325,205	-				-0.6
1,325,212	+				+0.6
1,325,220	-				+1.0
1,325,315	+		MIT1002_01203	0.12	+1.6
1,325,315	+		MIT1002_01203	0.12	+0.5
1,325,315	+		MIT1002_01203	0.12	-0.6
1,325,315	+		MIT1002_01203	0.12	-0.2
1,325,333	-		MIT1002_01203	0.12	-0.5
1,325,371	-		MIT1002_01203	0.14	+0.2
1,325,401	+		MIT1002_01203	0.15	+0.1
1,325,401	+		MIT1002_01203	0.15	+0.3
1,325,401	-		MIT1002_01203	0.15	+0.6
1,325,401	-		MIT1002_01203	0.15	+0.0
1,325,512	+		MIT1002_01203	0.19	+0.0
1,325,695	-		MIT1002_01203	0.25	+0.1
1,325,706	-		MIT1002_01203	0.25	+0.3
1,325,771	+		MIT1002_01203	0.27	-0.8
1,325,800	+		MIT1002_01203	0.28	+0.2
1,325,809	-		MIT1002_01203	0.29	+0.5
1,325,833	+		MIT1002_01203	0.30	+0.6