Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01107

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
1,214,558	+		MIT1002_01106	0.58	+0.2
1,214,663	-		MIT1002_01106	0.63	+0.6
1,214,752	+		MIT1002_01106	0.67	+0.2
1,214,791	-		MIT1002_01106	0.68	-0.4
1,214,818	-		MIT1002_01106	0.69	-0.4
1,214,855	+		MIT1002_01106	0.71	-0.3
1,214,876	+		MIT1002_01106	0.72	+0.5
1,214,964	+		MIT1002_01106	0.76	-0.2
1,215,071	+		MIT1002_01106	0.81	-0.8
1,215,299	+				-1.7
1,215,456	+				-1.3
1,215,456	+				-3.4
1,215,861	+		MIT1002_01107	0.29	-0.5
1,215,866	+		MIT1002_01107	0.30	-0.1
1,215,866	+		MIT1002_01107	0.30	-2.7
1,215,893	-		MIT1002_01107	0.32	-0.5
1,215,903	-		MIT1002_01107	0.33	-1.0
1,215,903	-		MIT1002_01107	0.33	-1.9
1,215,932	+		MIT1002_01107	0.36	+0.4
1,215,955	+		MIT1002_01107	0.38	+0.4
1,215,955	+		MIT1002_01107	0.38	-1.1
1,216,022	-		MIT1002_01107	0.44	+1.8
1,216,061	-		MIT1002_01107	0.47	-0.5
1,216,193	-		MIT1002_01107	0.59	-0.0
1,216,196	+		MIT1002_01107	0.59	+0.0
1,216,198	-		MIT1002_01107	0.59	+1.3
1,216,204	-		MIT1002_01107	0.60	-0.1
1,216,260	-		MIT1002_01107	0.65	-0.2
1,216,400	+		MIT1002_01107	0.77	-0.4
1,216,438	-		MIT1002_01107	0.80	-0.3
1,216,444	-		MIT1002_01107	0.81	-0.2
1,216,452	+		MIT1002_01107	0.82	-2.0
1,216,542	+		MIT1002_01107	0.90	-0.2
1,216,556	-				+1.7
1,216,571	+				+0.5
1,216,579	-				-0.3
1,216,692	+				+1.2
1,216,742	+				-0.8
1,216,760	+				-0.1
1,216,906	+		MIT1002_01108	0.29	+0.5
1,216,912	-		MIT1002_01108	0.29	+0.5
1,216,914	-		MIT1002_01108	0.30	+1.1
1,216,975	+		MIT1002_01108	0.38	+1.1
1,216,975	+		MIT1002_01108	0.38	-1.9
1,216,983	-		MIT1002_01108	0.39	-0.8
1,216,983	-		MIT1002_01108	0.39	-3.4
1,217,012	-		MIT1002_01108	0.42	+0.9
1,217,013	-		MIT1002_01108	0.43	-0.3
1,217,093	-		MIT1002_01108	0.53	-0.4
1,217,094	+		MIT1002_01108	0.53	-0.5
1,217,108	-		MIT1002_01108	0.55	+0.0
1,217,167	+		MIT1002_01108	0.63	-1.5
1,217,167	+		MIT1002_01108	0.63	-0.6
1,217,167	+		MIT1002_01108	0.63	+1.3
1,217,167	+		MIT1002_01108	0.63	-0.3
1,217,167	+		MIT1002_01108	0.63	-0.2
1,217,175	-		MIT1002_01108	0.64	-0.8
1,217,175	-		MIT1002_01108	0.64	-2.7
1,217,223	-		MIT1002_01108	0.70	-0.0
1,217,327	+		MIT1002_01108	0.84	-1.9
1,217,332	+		MIT1002_01108	0.84	-2.0
1,217,335	-		MIT1002_01108	0.85	-0.2
1,217,349	+		MIT1002_01108	0.87	-1.4
1,217,363	+		MIT1002_01108	0.88	-0.1
1,217,371	-		MIT1002_01108	0.89	-0.7
1,217,371	-		MIT1002_01108	0.89	+1.0
1,217,418	-				-0.3
1,217,437	+				-0.5
1,217,474	+				+1.1
1,217,500	-				-0.2
1,217,543	-		MIT1002_01109	0.10	+0.3
1,217,588	-		MIT1002_01109	0.16	-0.0