Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01062

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
1,171,977	+		MIT1002_01060	0.68	+0.2
1,171,977	+		MIT1002_01060	0.68	+0.1
1,171,977	+		MIT1002_01060	0.68	+0.5
1,171,977	+		MIT1002_01060	0.68	+0.1
1,171,977	+		MIT1002_01060	0.68	-1.8
1,171,978	-		MIT1002_01060	0.68	+0.2
1,171,978	-		MIT1002_01060	0.68	-0.1
1,171,985	-		MIT1002_01060	0.68	+0.0
1,171,985	-		MIT1002_01060	0.68	-2.8
1,171,985	-		MIT1002_01060	0.68	+0.8
1,172,173	+		MIT1002_01060	0.85	+0.7
1,172,181	-		MIT1002_01060	0.85	-1.2
1,172,308	-				+0.6
1,172,342	-				-0.0
1,172,414	-		MIT1002_01061	0.12	+0.2
1,172,493	-		MIT1002_01061	0.25	+0.6
1,172,579	-		MIT1002_01061	0.39	-0.4
1,172,592	+		MIT1002_01061	0.41	+0.2
1,172,651	-		MIT1002_01061	0.51	-0.9
1,172,651	-		MIT1002_01061	0.51	+1.6
1,172,651	-		MIT1002_01061	0.51	+0.9
1,172,665	+		MIT1002_01061	0.53	+0.2
1,172,692	+		MIT1002_01061	0.57	+0.2
1,172,785	-		MIT1002_01061	0.72	-0.5
1,172,845	+		MIT1002_01061	0.82	+0.1
1,172,855	+		MIT1002_01061	0.83	-0.9
1,172,879	+		MIT1002_01061	0.87	-0.1
1,172,892	+		MIT1002_01061	0.89	+1.1
1,172,937	-				+0.9
1,172,965	+				+0.3
1,172,965	+				+1.8
1,173,062	+		MIT1002_01062	0.13	-0.5
1,173,070	-		MIT1002_01062	0.14	-0.3
1,173,072	+		MIT1002_01062	0.15	-0.0
1,173,081	+		MIT1002_01062	0.16	+0.4
1,173,123	-		MIT1002_01062	0.22	-0.9
1,173,133	+		MIT1002_01062	0.23	-0.1
1,173,144	+		MIT1002_01062	0.25	-0.4
1,173,170	-		MIT1002_01062	0.28	-0.6
1,173,170	-		MIT1002_01062	0.28	-1.1
1,173,228	+		MIT1002_01062	0.37	-0.7
1,173,236	-		MIT1002_01062	0.38	+1.0
1,173,249	-		MIT1002_01062	0.40	-0.3
1,173,299	+		MIT1002_01062	0.47	+0.6
1,173,301	+		MIT1002_01062	0.47	+0.2
1,173,515	-		MIT1002_01062	0.77	-0.3
1,173,570	+		MIT1002_01062	0.85	-1.4
1,173,570	+		MIT1002_01062	0.85	-0.7
1,173,578	-		MIT1002_01062	0.86	-1.2
1,173,670	+				-0.8
1,173,672	+				-0.5
1,173,672	+				-2.1
1,173,672	+				-1.3
1,173,680	-				-0.3
1,173,680	-				+0.4
1,173,703	+				-0.8
1,173,875	-		MIT1002_01063	0.18	-0.3
1,174,041	+		MIT1002_01063	0.32	-0.2
1,174,084	+		MIT1002_01063	0.35	+0.1
1,174,099	-		MIT1002_01063	0.37	+0.3
1,174,117	+		MIT1002_01063	0.38	-0.6
1,174,125	-		MIT1002_01063	0.39	+0.9
1,174,176	+		MIT1002_01063	0.43	+0.9
1,174,201	-		MIT1002_01063	0.45	-2.3
1,174,217	-		MIT1002_01063	0.47	-0.7
1,174,219	+		MIT1002_01063	0.47	-2.5
1,174,219	-		MIT1002_01063	0.47	+0.3
1,174,219	-		MIT1002_01063	0.47	+0.7
1,174,227	-		MIT1002_01063	0.47	+0.6
1,174,227	-		MIT1002_01063	0.47	+0.4
1,174,242	+		MIT1002_01063	0.49	-0.2
1,174,262	+		MIT1002_01063	0.50	+1.0
1,174,301	+		MIT1002_01063	0.54	-1.0
1,174,302	-		MIT1002_01063	0.54	+0.1
1,174,309	-		MIT1002_01063	0.54	+0.2
1,174,314	-		MIT1002_01063	0.55	+0.3
1,174,332	-		MIT1002_01063	0.56	+1.5
1,174,372	+		MIT1002_01063	0.60	-0.0
1,174,372	+		MIT1002_01063	0.60	-0.4
1,174,379	-		MIT1002_01063	0.60	-0.1
1,174,379	-		MIT1002_01063	0.60	-0.3
1,174,380	-		MIT1002_01063	0.60	+2.8
1,174,380	-		MIT1002_01063	0.60	+1.3
1,174,380	-		MIT1002_01063	0.60	+0.9
1,174,380	-		MIT1002_01063	0.60	+0.1
1,174,380	-		MIT1002_01063	0.60	+0.6
1,174,395	-		MIT1002_01063	0.62	+1.0
1,174,423	-		MIT1002_01063	0.64	+0.2
1,174,562	+		MIT1002_01063	0.76	+0.4
1,174,570	-		MIT1002_01063	0.77	-0.5
1,174,583	+		MIT1002_01063	0.78	-0.5
1,174,591	-		MIT1002_01063	0.78	-0.9
1,174,604	+		MIT1002_01063	0.80	-0.9