Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00948

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
1,049,653	-		MIT1002_00947	0.32	-2.8
1,049,653	-		MIT1002_00947	0.32	-3.3
1,049,689	+		MIT1002_00947	0.35	-3.0
1,049,706	+		MIT1002_00947	0.36	-5.4
1,049,723	+		MIT1002_00947	0.37	-2.4
1,049,726	-		MIT1002_00947	0.37	-3.0
1,049,729	+		MIT1002_00947	0.37	-9.3
1,049,731	-		MIT1002_00947	0.38	-5.3
1,049,731	-		MIT1002_00947	0.38	-4.8
1,049,740	+		MIT1002_00947	0.38	-3.3
1,049,752	+		MIT1002_00947	0.39	-5.1
1,049,812	-		MIT1002_00947	0.43	-3.6
1,049,847	+		MIT1002_00947	0.46	-3.0
1,049,847	+		MIT1002_00947	0.46	-2.4
1,049,861	-		MIT1002_00947	0.47	-0.8
1,049,874	+		MIT1002_00947	0.48	-5.4
1,049,874	+		MIT1002_00947	0.48	-0.5
1,049,875	+		MIT1002_00947	0.48	-1.3
1,049,884	-		MIT1002_00947	0.48	-4.2
1,049,884	-		MIT1002_00947	0.48	-5.7
1,049,884	-		MIT1002_00947	0.48	-5.8
1,049,956	+		MIT1002_00947	0.54	-4.5
1,049,962	-		MIT1002_00947	0.54	-3.9
1,049,988	+		MIT1002_00947	0.56	-3.9
1,049,988	+		MIT1002_00947	0.56	-4.3
1,050,022	+		MIT1002_00947	0.58	-5.7
1,050,134	-		MIT1002_00947	0.66	-2.6
1,050,155	-		MIT1002_00947	0.68	-5.3
1,050,161	+		MIT1002_00947	0.68	-3.0
1,050,161	+		MIT1002_00947	0.68	-3.7
1,050,163	+		MIT1002_00947	0.68	-6.7
1,050,169	-		MIT1002_00947	0.69	-3.7
1,050,179	-		MIT1002_00947	0.70	-2.8
1,050,217	+		MIT1002_00947	0.72	-5.7
1,050,217	+		MIT1002_00947	0.72	-3.4
1,050,217	+		MIT1002_00947	0.72	-1.8
1,050,222	-		MIT1002_00947	0.73	-2.1
1,050,225	-		MIT1002_00947	0.73	-4.3
1,050,227	-		MIT1002_00947	0.73	-5.3
1,050,240	+		MIT1002_00947	0.74	-3.4
1,050,299	-		MIT1002_00947	0.78	-2.3
1,050,388	-		MIT1002_00947	0.84	-5.1
1,050,458	+		MIT1002_00947	0.89	-6.1
1,050,537	-				-2.3
1,050,541	-				-4.1
1,050,594	+				-4.5
1,050,627	+				-4.4
1,050,664	-				-3.3
1,050,730	-		MIT1002_00948	0.10	-7.1
1,050,781	+		MIT1002_00948	0.15	-2.3
1,050,791	+		MIT1002_00948	0.16	-4.4
1,050,837	-		MIT1002_00948	0.20	-5.0
1,050,837	-		MIT1002_00948	0.20	-2.1
1,050,881	+		MIT1002_00948	0.24	-3.8
1,050,881	+		MIT1002_00948	0.24	-2.8
1,050,889	-		MIT1002_00948	0.25	-3.5
1,050,974	+		MIT1002_00948	0.33	-8.5
1,050,974	+		MIT1002_00948	0.33	-4.6
1,050,986	+		MIT1002_00948	0.34	-5.4
1,050,991	+		MIT1002_00948	0.34	-2.7
1,050,999	-		MIT1002_00948	0.35	-5.2
1,051,001	+		MIT1002_00948	0.35	-5.7
1,051,004	-		MIT1002_00948	0.35	-3.3
1,051,017	+		MIT1002_00948	0.37	-4.1
1,051,039	+		MIT1002_00948	0.39	-2.4
1,051,039	+		MIT1002_00948	0.39	-4.9
1,051,055	+		MIT1002_00948	0.40	-1.7
1,051,129	+		MIT1002_00948	0.47	-3.7
1,051,161	+		MIT1002_00948	0.50	-2.7
1,051,161	+		MIT1002_00948	0.50	-9.1
1,051,171	+		MIT1002_00948	0.51	-5.4
1,051,179	-		MIT1002_00948	0.51	-9.0
1,051,239	+		MIT1002_00948	0.57	-3.9
1,051,380	-		MIT1002_00948	0.70	-5.0
1,051,404	-		MIT1002_00948	0.72	-2.2
1,051,404	-		MIT1002_00948	0.72	-5.4
1,051,406	+		MIT1002_00948	0.72	-5.7
1,051,425	+		MIT1002_00948	0.74	-1.5
1,051,449	-		MIT1002_00948	0.76	-5.0
1,051,450	-		MIT1002_00948	0.76	-2.1
1,051,478	-		MIT1002_00948	0.79	-4.7
1,051,483	-		MIT1002_00948	0.79	-6.9
1,051,492	-		MIT1002_00948	0.80	-3.7
1,051,522	+		MIT1002_00948	0.83	-4.3
1,051,524	+		MIT1002_00948	0.83	-2.5
1,051,542	+		MIT1002_00948	0.84	-2.1
1,051,598	+		MIT1002_00948	0.90	-5.2
1,051,633	+				-5.9
1,051,669	-				-2.9
1,051,669	-				-3.7
1,051,718	-				-2.0
1,051,718	-				-3.8
1,051,774	+				-0.5
1,051,799	-				-1.0
1,051,962	+		MIT1002_00949	0.16	-1.7
1,051,962	-		MIT1002_00949	0.16	-0.8
1,052,002	+		MIT1002_00949	0.19	-5.1
1,052,082	-		MIT1002_00949	0.24	-3.9
1,052,143	+		MIT1002_00949	0.28	-2.3
1,052,152	-		MIT1002_00949	0.28	-3.4
1,052,152	-		MIT1002_00949	0.28	-3.7
1,052,197	+		MIT1002_00949	0.31	-3.9
1,052,225	-		MIT1002_00949	0.33	-2.0
1,052,225	-		MIT1002_00949	0.33	-1.3
1,052,291	+		MIT1002_00949	0.37	-3.9
1,052,367	+		MIT1002_00949	0.42	-7.5
1,052,372	+		MIT1002_00949	0.42	-3.6
1,052,386	-		MIT1002_00949	0.43	-4.2
1,052,459	+		MIT1002_00949	0.48	-4.3
1,052,459	+		MIT1002_00949	0.48	-4.4
1,052,459	+		MIT1002_00949	0.48	-4.7
1,052,459	+		MIT1002_00949	0.48	-6.1
1,052,459	+		MIT1002_00949	0.48	-2.1
1,052,459	+		MIT1002_00949	0.48	-4.2
1,052,459	+		MIT1002_00949	0.48	-5.7
1,052,459	+		MIT1002_00949	0.48	-2.8
1,052,459	+		MIT1002_00949	0.48	-3.8
1,052,459	+		MIT1002_00949	0.48	-7.4
1,052,459	+		MIT1002_00949	0.48	-3.0
1,052,467	-		MIT1002_00949	0.48	-6.8
1,052,467	-		MIT1002_00949	0.48	-1.8
1,052,467	-		MIT1002_00949	0.48	-2.5
1,052,467	-		MIT1002_00949	0.48	-4.6
1,052,467	-		MIT1002_00949	0.48	-2.8
1,052,467	-		MIT1002_00949	0.48	-4.0
1,052,467	-		MIT1002_00949	0.48	-5.3
1,052,485	+		MIT1002_00949	0.49	-7.1
1,052,524	-		MIT1002_00949	0.52	-0.8
1,052,573	+		MIT1002_00949	0.55	-3.9
1,052,581	-		MIT1002_00949	0.56	-3.7
1,052,601	-		MIT1002_00949	0.57	-5.2
1,052,603	+		MIT1002_00949	0.57	-4.5
1,052,603	+		MIT1002_00949	0.57	-4.5
1,052,611	-		MIT1002_00949	0.58	-4.8