Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00108

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 3
115,378	-				-2.6
115,378	-				-4.5
115,453	-				+1.0
115,508	-				-3.2
115,576	-				-0.6
115,576	-				-3.5
115,601	+		MIT1002_00107	0.17	-0.8
115,621	+		MIT1002_00107	0.24	-2.5
115,691	-		MIT1002_00107	0.50	-1.9
115,741	-		MIT1002_00107	0.68	-0.8
115,809	+				-0.3
115,817	-				+0.4
115,918	+				+0.3
115,938	+				+1.9
115,956	+				-0.5
117,421	-		MIT1002_00108	0.69	-0.8
117,426	-		MIT1002_00108	0.69	-3.2
117,446	+		MIT1002_00108	0.70	-3.3
117,446	+		MIT1002_00108	0.70	-1.0
117,456	+		MIT1002_00108	0.70	-1.5
117,456	+		MIT1002_00108	0.70	-1.9
117,464	-		MIT1002_00108	0.71	-2.1
117,464	-		MIT1002_00108	0.71	-0.4
117,502	+		MIT1002_00108	0.73	-1.4
117,551	-		MIT1002_00108	0.75	-3.2
117,572	+		MIT1002_00108	0.76	-2.8
117,598	+		MIT1002_00108	0.77	-3.7
117,713	+		MIT1002_00108	0.83	-3.1
117,723	-		MIT1002_00108	0.83	-3.3
117,728	-		MIT1002_00108	0.83	-1.9
117,811	-		MIT1002_00108	0.87	-3.9
117,842	-		MIT1002_00108	0.89	-4.2
117,908	-				-2.4
117,960	-				-3.0
118,032	-				-5.1
118,037	-				-4.4
118,052	-				-2.7
118,108	+				-1.7
118,116	+				-1.6
118,116	-				-1.1
118,279	+		MIT1002_00109	0.45	-4.4
118,287	-		MIT1002_00109	0.47	-1.0
118,287	-		MIT1002_00109	0.47	-2.9
118,287	-		MIT1002_00109	0.47	-2.2
118,287	-		MIT1002_00109	0.47	-3.9
118,289	+		MIT1002_00109	0.47	-1.6
118,291	+		MIT1002_00109	0.48	-0.8
118,321	-		MIT1002_00109	0.56	-1.0
118,402	+		MIT1002_00109	0.76	-2.3
118,402	+		MIT1002_00109	0.76	-1.2
118,402	+		MIT1002_00109	0.76	-2.4
118,402	+		MIT1002_00109	0.76	-0.9
118,404	-		MIT1002_00109	0.77	-1.9
118,404	-		MIT1002_00109	0.77	-2.5
118,410	-		MIT1002_00109	0.79	-2.0
118,410	-		MIT1002_00109	0.79	-2.7
118,410	-		MIT1002_00109	0.79	-2.2
118,410	-		MIT1002_00109	0.79	-3.2
118,410	-		MIT1002_00109	0.79	-1.8
118,410	-		MIT1002_00109	0.79	+0.6
118,421	+		MIT1002_00109	0.81	-0.9
118,432	-		MIT1002_00109	0.84	-3.9
118,439	-		MIT1002_00109	0.86	-2.6
118,441	+		MIT1002_00109	0.87	-3.2
118,441	+		MIT1002_00109	0.87	-2.1
118,441	+		MIT1002_00109	0.87	-1.9
118,441	+		MIT1002_00109	0.87	-3.8
118,441	+		MIT1002_00109	0.87	-4.1
118,441	+		MIT1002_00109	0.87	-1.5
118,441	+		MIT1002_00109	0.87	-1.1
118,449	-		MIT1002_00109	0.89	-3.0
118,449	-		MIT1002_00109	0.89	-2.7
118,449	-		MIT1002_00109	0.89	-2.5
118,449	-		MIT1002_00109	0.89	-2.4
118,449	-		MIT1002_00109	0.89	-2.5
118,604	-		MIT1002_00110	0.15	-0.3
118,644	-		MIT1002_00110	0.21	+0.8
118,680	+		MIT1002_00110	0.26	+0.0
118,682	+		MIT1002_00110	0.26	-0.0
118,685	-		MIT1002_00110	0.27	-0.5
118,690	-		MIT1002_00110	0.27	-0.5
118,692	+		MIT1002_00110	0.28	+0.9
118,760	+		MIT1002_00110	0.37	+0.4
118,780	+		MIT1002_00110	0.40	+1.1
118,822	+		MIT1002_00110	0.46	-0.9
118,822	+		MIT1002_00110	0.46	-1.9
118,825	-		MIT1002_00110	0.46	+0.2
118,876	+		MIT1002_00110	0.54	-0.1
118,900	-		MIT1002_00110	0.57	-0.4
118,918	+		MIT1002_00110	0.60	+0.2
119,002	+		MIT1002_00110	0.71	-0.8
119,002	+		MIT1002_00110	0.71	+0.3
119,002	+		MIT1002_00110	0.71	+2.0
119,002	+		MIT1002_00110	0.71	-1.0
119,002	+		MIT1002_00110	0.71	+1.2
119,002	+		MIT1002_00110	0.71	-1.9
119,010	-		MIT1002_00110	0.73	+1.2
119,010	-		MIT1002_00110	0.73	-0.1
119,010	-		MIT1002_00110	0.73	+3.0
119,032	-		MIT1002_00110	0.76	+0.6
119,035	-		MIT1002_00110	0.76	-0.4
119,039	+		MIT1002_00110	0.77	-0.7
119,042	-		MIT1002_00110	0.77	+1.6
119,078	-		MIT1002_00110	0.82	+0.9