Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17195

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,778,894	+		LRK53_RS17190	0.46	-0.3
3,778,894	+		LRK53_RS17190	0.46	+0.0
3,778,895	-		LRK53_RS17190	0.46	-0.5
3,778,895	-		LRK53_RS17190	0.46	-0.1
3,778,951	+		LRK53_RS17190	0.50	-1.3
3,778,951	+		LRK53_RS17190	0.50	+0.5
3,778,951	+		LRK53_RS17190	0.50	-0.4
3,778,951	+		LRK53_RS17190	0.50	-0.6
3,778,951	+		LRK53_RS17190	0.50	-0.5
3,778,951	+		LRK53_RS17190	0.50	-2.5
3,778,951	+		LRK53_RS17190	0.50	+1.4
3,778,951	+		LRK53_RS17190	0.50	-2.3
3,778,952	-		LRK53_RS17190	0.51	-0.2
3,778,952	-		LRK53_RS17190	0.51	+0.1
3,778,952	-		LRK53_RS17190	0.51	-0.4
3,778,952	-		LRK53_RS17190	0.51	-1.9
3,778,952	-		LRK53_RS17190	0.51	+0.4
3,778,952	-		LRK53_RS17190	0.51	-1.2
3,778,952	-		LRK53_RS17190	0.51	-0.7
3,778,952	-		LRK53_RS17190	0.51	-1.2
3,778,952	-		LRK53_RS17190	0.51	+0.7
3,778,972	+		LRK53_RS17190	0.52	+0.2
3,778,972	+		LRK53_RS17190	0.52	+0.6
3,778,972	+		LRK53_RS17190	0.52	+0.8
3,778,972	+		LRK53_RS17190	0.52	+0.0
3,778,972	+		LRK53_RS17190	0.52	-1.6
3,778,972	+		LRK53_RS17190	0.52	-0.4
3,778,972	+		LRK53_RS17190	0.52	-0.3
3,778,972	+		LRK53_RS17190	0.52	-0.2
3,778,972	+		LRK53_RS17190	0.52	+0.3
3,778,973	-		LRK53_RS17190	0.52	+0.6
3,778,973	-		LRK53_RS17190	0.52	-0.1
3,778,973	-		LRK53_RS17190	0.52	-0.3
3,778,973	-		LRK53_RS17190	0.52	-1.4
3,778,973	-		LRK53_RS17190	0.52	-1.1
3,778,973	-		LRK53_RS17190	0.52	+1.5
3,778,976	+		LRK53_RS17190	0.52	-0.9
3,778,976	+		LRK53_RS17190	0.52	-0.7
3,778,976	+		LRK53_RS17190	0.52	-1.9
3,778,976	+		LRK53_RS17190	0.52	-1.0
3,778,976	+		LRK53_RS17190	0.52	-1.3
3,778,977	-		LRK53_RS17190	0.53	-1.4
3,778,977	-		LRK53_RS17190	0.53	-1.1
3,778,977	-		LRK53_RS17190	0.53	-0.3
3,778,977	-		LRK53_RS17190	0.53	+0.0
3,778,977	-		LRK53_RS17190	0.53	-0.4
3,778,977	-		LRK53_RS17190	0.53	+0.4
3,778,977	-		LRK53_RS17190	0.53	+2.8
3,778,977	-		LRK53_RS17190	0.53	-0.6
3,778,977	-		LRK53_RS17190	0.53	-0.7
3,779,026	+		LRK53_RS17190	0.56	-2.2
3,779,026	+		LRK53_RS17190	0.56	-1.2
3,779,026	+		LRK53_RS17190	0.56	-1.2
3,779,026	+		LRK53_RS17190	0.56	-1.2
3,779,026	+		LRK53_RS17190	0.56	-0.6
3,779,026	+		LRK53_RS17190	0.56	+2.7
3,779,026	+		LRK53_RS17190	0.56	-0.8
3,779,027	-		LRK53_RS17190	0.57	-0.5
3,779,027	-		LRK53_RS17190	0.57	-1.0
3,779,153	-		LRK53_RS17190	0.67	-0.4
3,779,153	-		LRK53_RS17190	0.67	+0.0
3,779,227	+		LRK53_RS17190	0.73	-0.7
3,779,227	+		LRK53_RS17190	0.73	+1.8
3,779,227	+		LRK53_RS17190	0.73	-0.5
3,779,227	+		LRK53_RS17190	0.73	-2.3
3,779,228	-		LRK53_RS17190	0.73	+0.1
3,779,260	+		LRK53_RS17190	0.75	-1.2
3,779,260	+		LRK53_RS17190	0.75	-0.9
3,779,261	-		LRK53_RS17190	0.75	+0.1
3,779,347	+		LRK53_RS17190	0.82	+0.7
3,779,348	-		LRK53_RS17190	0.82	-0.7
3,779,614	+				+0.0
3,779,615	+				-1.2
3,779,616	-				-0.9
3,779,616	-				-0.0
3,779,812	-		LRK53_RS17195	0.19	+0.2
3,779,812	-		LRK53_RS17195	0.19	+0.1
3,779,812	-		LRK53_RS17195	0.19	+0.3
3,779,812	-		LRK53_RS17195	0.19	+0.0
3,779,812	-		LRK53_RS17195	0.19	+1.7
3,779,812	-		LRK53_RS17195	0.19	-1.6
3,779,812	-		LRK53_RS17195	0.19	+1.3
3,779,812	-		LRK53_RS17195	0.19	-1.4
3,779,812	-		LRK53_RS17195	0.19	-1.2
3,779,812	-		LRK53_RS17195	0.19	-1.2
3,779,812	-		LRK53_RS17195	0.19	-0.5
3,779,812	-		LRK53_RS17195	0.19	-0.7
3,779,812	-		LRK53_RS17195	0.19	-0.4
3,779,812	-		LRK53_RS17195	0.19	-0.6
3,779,812	-		LRK53_RS17195	0.19	-1.2
3,779,812	-		LRK53_RS17195	0.19	+0.5
3,779,812	-		LRK53_RS17195	0.19	+1.3
3,779,812	-		LRK53_RS17195	0.19	-2.1
3,779,812	-		LRK53_RS17195	0.19	-0.7
3,780,051	+		LRK53_RS17195	0.50	-1.2
3,780,051	+		LRK53_RS17195	0.50	-0.2
3,780,051	+		LRK53_RS17195	0.50	+1.5
3,780,051	+		LRK53_RS17195	0.50	-1.0
3,780,097	-		LRK53_RS17195	0.56	-0.0
3,780,097	-		LRK53_RS17195	0.56	-0.5
3,780,097	-		LRK53_RS17195	0.56	-1.6
3,780,097	-		LRK53_RS17195	0.56	+0.4
3,780,097	-		LRK53_RS17195	0.56	-1.1
3,780,132	+		LRK53_RS17195	0.61	-0.4
3,780,132	+		LRK53_RS17195	0.61	+0.1
3,780,132	+		LRK53_RS17195	0.61	+0.6
3,780,132	+		LRK53_RS17195	0.61	-3.0
3,780,132	+		LRK53_RS17195	0.61	+0.5
3,780,132	+		LRK53_RS17195	0.61	-2.4
3,780,132	+		LRK53_RS17195	0.61	+0.8
3,780,132	+		LRK53_RS17195	0.61	+0.3
3,780,132	+		LRK53_RS17195	0.61	+1.4
3,780,482	+				-0.8
3,780,482	+				-0.9
3,780,482	+				-1.7
3,780,482	+				-0.3
3,780,483	-				-3.2
3,780,483	-				-0.2
3,780,483	-				+0.1
3,780,483	-				-0.9
3,780,513	-				+0.7
3,780,513	-				-1.5
3,780,513	-				-1.1
3,780,537	+				-0.3
3,780,537	+				+0.8
3,780,537	+				-0.0
3,780,537	+				-1.2
3,780,538	-				-0.2
3,780,538	-				-0.1
3,780,538	-				-1.1
3,780,538	-				+0.0
3,780,538	-				-0.8
3,780,644	+		LRK53_RS17200	0.13	-2.1
3,780,644	+		LRK53_RS17200	0.13	-1.2
3,780,644	+		LRK53_RS17200	0.13	-2.6
3,780,644	+		LRK53_RS17200	0.13	-0.9
3,780,644	+		LRK53_RS17200	0.13	-1.9
3,780,644	+		LRK53_RS17200	0.13	-0.5
3,780,644	+		LRK53_RS17200	0.13	-0.9
3,780,645	-		LRK53_RS17200	0.13	-0.5
3,780,645	-		LRK53_RS17200	0.13	+0.0
3,780,645	-		LRK53_RS17200	0.13	+1.7
3,780,645	-		LRK53_RS17200	0.13	-0.5
3,780,645	-		LRK53_RS17200	0.13	+1.8
3,780,645	-		LRK53_RS17200	0.13	-1.6
3,780,645	-		LRK53_RS17200	0.13	-1.7
3,780,645	-		LRK53_RS17200	0.13	-0.4
3,780,645	-		LRK53_RS17200	0.13	-0.6
3,780,645	-		LRK53_RS17200	0.13	-2.2
3,780,800	+		LRK53_RS17200	0.24	+0.6
3,780,800	+		LRK53_RS17200	0.24	-0.6
3,780,800	+		LRK53_RS17200	0.24	-1.8
3,780,800	+		LRK53_RS17200	0.24	-1.0
3,780,800	+		LRK53_RS17200	0.24	-1.2
3,780,800	+		LRK53_RS17200	0.24	-0.4
3,780,800	+		LRK53_RS17200	0.24	-0.2
3,780,800	+		LRK53_RS17200	0.24	-1.5
3,780,801	-		LRK53_RS17200	0.24	-0.3
3,780,801	-		LRK53_RS17200	0.24	-0.2
3,780,801	-		LRK53_RS17200	0.24	-1.2
3,780,801	-		LRK53_RS17200	0.24	-1.6
3,780,801	-		LRK53_RS17200	0.24	-0.5
3,780,801	-		LRK53_RS17200	0.24	+0.0
3,780,803	+		LRK53_RS17200	0.24	+0.7
3,780,803	+		LRK53_RS17200	0.24	-0.9
3,780,804	-		LRK53_RS17200	0.24	-0.8
3,780,833	+		LRK53_RS17200	0.26	-0.8
3,780,833	+		LRK53_RS17200	0.26	+0.4
3,780,833	+		LRK53_RS17200	0.26	-1.1
3,780,833	+		LRK53_RS17200	0.26	+0.4
3,780,833	+		LRK53_RS17200	0.26	+1.3
3,780,833	+		LRK53_RS17200	0.26	-1.5
3,780,833	+		LRK53_RS17200	0.26	-0.5
3,780,833	+		LRK53_RS17200	0.26	-1.6
3,780,833	+		LRK53_RS17200	0.26	-1.1
3,780,833	+		LRK53_RS17200	0.26	+1.1
3,780,833	+		LRK53_RS17200	0.26	-0.8
3,780,833	+		LRK53_RS17200	0.26	-1.7
3,780,833	+		LRK53_RS17200	0.26	-1.1
3,780,833	+		LRK53_RS17200	0.26	-1.0
3,780,833	+		LRK53_RS17200	0.26	+0.0
3,780,833	+		LRK53_RS17200	0.26	-2.7
3,780,833	+		LRK53_RS17200	0.26	+0.2
3,780,833	+		LRK53_RS17200	0.26	-0.6
3,780,833	+		LRK53_RS17200	0.26	-1.7
3,780,833	+		LRK53_RS17200	0.26	+0.5
3,780,833	+		LRK53_RS17200	0.26	-0.3
3,780,834	-		LRK53_RS17200	0.26	+0.0
3,780,834	-		LRK53_RS17200	0.26	-2.1
3,780,834	-		LRK53_RS17200	0.26	-1.4
3,780,834	-		LRK53_RS17200	0.26	-0.9
3,780,834	-		LRK53_RS17200	0.26	+0.3
3,780,834	-		LRK53_RS17200	0.26	-1.1
3,780,834	-		LRK53_RS17200	0.26	-1.3
3,780,834	-		LRK53_RS17200	0.26	-2.1
3,780,834	-		LRK53_RS17200	0.26	-1.0
3,780,834	-		LRK53_RS17200	0.26	-1.7
3,780,834	-		LRK53_RS17200	0.26	-1.1
3,780,834	-		LRK53_RS17200	0.26	-0.2
3,780,834	-		LRK53_RS17200	0.26	-0.0
3,780,834	-		LRK53_RS17200	0.26	-0.9
3,780,834	-		LRK53_RS17200	0.26	-2.7
3,780,834	-		LRK53_RS17200	0.26	-0.9
3,780,834	-		LRK53_RS17200	0.26	-1.5
3,780,834	-		LRK53_RS17200	0.26	-2.5
3,780,902	+		LRK53_RS17200	0.31	+0.3
3,780,903	-		LRK53_RS17200	0.31	+0.3
3,780,989	+		LRK53_RS17200	0.37	-2.0
3,780,989	+		LRK53_RS17200	0.37	-1.2
3,780,989	+		LRK53_RS17200	0.37	-1.5
3,780,989	+		LRK53_RS17200	0.37	+1.3
3,780,989	+		LRK53_RS17200	0.37	-1.4
3,780,989	+		LRK53_RS17200	0.37	+1.2
3,780,989	+		LRK53_RS17200	0.37	-0.2
3,780,990	-		LRK53_RS17200	0.37	-1.1
3,780,990	-		LRK53_RS17200	0.37	+0.2
3,780,990	-		LRK53_RS17200	0.37	-1.2
3,780,990	-		LRK53_RS17200	0.37	-0.5
3,780,990	-		LRK53_RS17200	0.37	+0.0
3,780,990	-		LRK53_RS17200	0.37	-0.4
3,780,995	+		LRK53_RS17200	0.38	-1.7
3,780,996	-		LRK53_RS17200	0.38	-2.0
3,780,996	-		LRK53_RS17200	0.38	-1.7
3,780,996	-		LRK53_RS17200	0.38	+1.0
3,780,996	-		LRK53_RS17200	0.38	+0.9
3,780,996	-		LRK53_RS17200	0.38	+0.8
3,781,115	+		LRK53_RS17200	0.46	-2.8
3,781,121	+		LRK53_RS17200	0.47	-0.3
3,781,121	+		LRK53_RS17200	0.47	-0.2
3,781,121	+		LRK53_RS17200	0.47	-2.2
3,781,121	+		LRK53_RS17200	0.47	-2.2
3,781,121	+		LRK53_RS17200	0.47	+1.0
3,781,121	+		LRK53_RS17200	0.47	-0.1
3,781,121	+		LRK53_RS17200	0.47	-0.6
3,781,121	+		LRK53_RS17200	0.47	+0.5
3,781,121	+		LRK53_RS17200	0.47	-0.5
3,781,121	+		LRK53_RS17200	0.47	-0.9
3,781,122	-		LRK53_RS17200	0.47	+0.0
3,781,122	-		LRK53_RS17200	0.47	-0.9
3,781,122	-		LRK53_RS17200	0.47	-0.5
3,781,122	-		LRK53_RS17200	0.47	+0.3
3,781,122	-		LRK53_RS17200	0.47	-0.5
3,781,122	-		LRK53_RS17200	0.47	+0.3
3,781,122	-		LRK53_RS17200	0.47	-2.7
3,781,122	-		LRK53_RS17200	0.47	+0.4
3,781,122	-		LRK53_RS17200	0.47	+1.3
3,781,122	-		LRK53_RS17200	0.47	-2.0
3,781,122	-		LRK53_RS17200	0.47	-1.3
3,781,122	-		LRK53_RS17200	0.47	-0.2
3,781,205	+		LRK53_RS17200	0.53	-0.2
3,781,205	+		LRK53_RS17200	0.53	-0.3
3,781,205	+		LRK53_RS17200	0.53	-0.9
3,781,206	-		LRK53_RS17200	0.53	-1.4
3,781,206	-		LRK53_RS17200	0.53	-0.7
3,781,206	-		LRK53_RS17200	0.53	-1.3
3,781,206	-		LRK53_RS17200	0.53	-1.3
3,781,206	-		LRK53_RS17200	0.53	+0.8
3,781,206	-		LRK53_RS17200	0.53	-0.5
3,781,206	-		LRK53_RS17200	0.53	+0.2
3,781,206	-		LRK53_RS17200	0.53	-0.3
3,781,206	-		LRK53_RS17200	0.53	-0.2
3,781,376	+		LRK53_RS17200	0.65	+1.4
3,781,376	+		LRK53_RS17200	0.65	+0.5
3,781,376	+		LRK53_RS17200	0.65	-0.1
3,781,376	+		LRK53_RS17200	0.65	-1.2
3,781,376	+		LRK53_RS17200	0.65	-1.5
3,781,377	-		LRK53_RS17200	0.65	-2.0
3,781,377	-		LRK53_RS17200	0.65	-0.5
3,781,377	-		LRK53_RS17200	0.65	-3.4
3,781,377	-		LRK53_RS17200	0.65	-2.7
3,781,377	-		LRK53_RS17200	0.65	-1.4
3,781,377	-		LRK53_RS17200	0.65	+1.2
3,781,377	-		LRK53_RS17200	0.65	-0.3
3,781,377	-		LRK53_RS17200	0.65	-0.5
3,781,377	-		LRK53_RS17200	0.65	-0.6
3,781,377	-		LRK53_RS17200	0.65	-1.2
3,781,377	-		LRK53_RS17200	0.65	-1.5
3,781,415	+		LRK53_RS17200	0.68	-0.9
3,781,415	+		LRK53_RS17200	0.68	-1.0
3,781,415	+		LRK53_RS17200	0.68	-0.3
3,781,415	+		LRK53_RS17200	0.68	-0.2
3,781,416	-		LRK53_RS17200	0.68	+2.4
3,781,416	-		LRK53_RS17200	0.68	-0.1