Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17145

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,770,798	+		LRK53_RS17140	0.11	+0.3
3,770,798	+		LRK53_RS17140	0.11	+0.0
3,770,798	+		LRK53_RS17140	0.11	-0.1
3,770,798	+		LRK53_RS17140	0.11	-1.1
3,770,798	+		LRK53_RS17140	0.11	-0.8
3,770,798	+		LRK53_RS17140	0.11	-0.0
3,770,798	+		LRK53_RS17140	0.11	-0.4
3,770,799	-		LRK53_RS17140	0.12	-1.0
3,770,799	-		LRK53_RS17140	0.12	-1.0
3,770,799	-		LRK53_RS17140	0.12	-1.1
3,770,799	-		LRK53_RS17140	0.12	-0.1
3,770,799	-		LRK53_RS17140	0.12	-0.9
3,770,799	-		LRK53_RS17140	0.12	-0.4
3,770,799	-		LRK53_RS17140	0.12	+0.1
3,770,799	-		LRK53_RS17140	0.12	+2.0
3,770,799	-		LRK53_RS17140	0.12	-2.2
3,770,799	-		LRK53_RS17140	0.12	-0.6
3,770,799	-		LRK53_RS17140	0.12	+0.2
3,770,799	-		LRK53_RS17140	0.12	-2.0
3,770,799	-		LRK53_RS17140	0.12	-0.9
3,770,828	+		LRK53_RS17140	0.15	-0.1
3,770,828	+		LRK53_RS17140	0.15	-0.2
3,770,829	-		LRK53_RS17140	0.15	+0.2
3,770,948	+		LRK53_RS17140	0.30	-1.1
3,770,948	+		LRK53_RS17140	0.30	+0.9
3,770,949	-		LRK53_RS17140	0.30	-1.5
3,770,949	-		LRK53_RS17140	0.30	-1.4
3,770,949	-		LRK53_RS17140	0.30	+0.4
3,771,173	+		LRK53_RS17140	0.57	-0.1
3,771,173	+		LRK53_RS17140	0.57	+0.4
3,771,173	+		LRK53_RS17140	0.57	-0.6
3,771,173	+		LRK53_RS17140	0.57	+0.3
3,771,173	+		LRK53_RS17140	0.57	-1.0
3,771,173	+		LRK53_RS17140	0.57	-2.8
3,771,173	+		LRK53_RS17140	0.57	-1.2
3,771,174	-		LRK53_RS17140	0.57	+0.0
3,771,174	-		LRK53_RS17140	0.57	-1.5
3,771,174	-		LRK53_RS17140	0.57	-0.7
3,771,174	-		LRK53_RS17140	0.57	+0.1
3,771,174	-		LRK53_RS17140	0.57	+0.2
3,771,174	-		LRK53_RS17140	0.57	-2.8
3,771,174	-		LRK53_RS17140	0.57	+0.9
3,771,174	-		LRK53_RS17140	0.57	-0.1
3,771,174	-		LRK53_RS17140	0.57	-2.6
3,771,174	-		LRK53_RS17140	0.57	-3.1
3,771,230	+		LRK53_RS17140	0.64	-2.3
3,771,230	+		LRK53_RS17140	0.64	-0.9
3,771,230	+		LRK53_RS17140	0.64	-0.5
3,771,230	+		LRK53_RS17140	0.64	-2.4
3,771,230	+		LRK53_RS17140	0.64	+0.0
3,771,231	-		LRK53_RS17140	0.64	+0.2
3,771,263	+		LRK53_RS17140	0.68	+1.7
3,771,263	+		LRK53_RS17140	0.68	+2.4
3,771,263	+		LRK53_RS17140	0.68	-2.2
3,771,264	-		LRK53_RS17140	0.68	-0.1
3,771,264	-		LRK53_RS17140	0.68	+0.7
3,771,264	-		LRK53_RS17140	0.68	-2.2
3,771,264	-		LRK53_RS17140	0.68	+0.6
3,771,264	-		LRK53_RS17140	0.68	+1.4
3,771,264	-		LRK53_RS17140	0.68	+0.2
3,771,264	-		LRK53_RS17140	0.68	-0.9
3,771,264	-		LRK53_RS17140	0.68	-0.5
3,771,264	-		LRK53_RS17140	0.68	-1.2
3,771,264	-		LRK53_RS17140	0.68	+0.4
3,771,264	-		LRK53_RS17140	0.68	+0.2
3,771,264	-		LRK53_RS17140	0.68	+0.1
3,771,600	+				+0.2
3,771,600	+				-0.2
3,771,600	+				-0.8
3,771,600	+				-0.9
3,771,600	+				-1.5
3,771,601	-				-1.5
3,771,601	-				-0.6
3,771,601	-				-0.6
3,771,601	-				-0.6
3,771,601	-				-0.5
3,771,658	+				-0.2
3,771,658	+				-0.5
3,771,658	+				-1.2
3,771,658	+				-0.8
3,771,659	-				-1.2
3,771,659	-				-0.8
3,771,659	-				-0.6
3,771,659	-				+2.2
3,771,812	+		LRK53_RS17145	0.12	-0.5
3,771,813	-		LRK53_RS17145	0.12	+2.2
3,771,821	+		LRK53_RS17145	0.13	+1.8
3,771,821	+		LRK53_RS17145	0.13	+0.4
3,771,821	+		LRK53_RS17145	0.13	+0.7
3,771,821	+		LRK53_RS17145	0.13	+0.7
3,771,821	+		LRK53_RS17145	0.13	+0.4
3,771,821	+		LRK53_RS17145	0.13	-0.2
3,771,822	-		LRK53_RS17145	0.13	+2.0
3,771,822	-		LRK53_RS17145	0.13	+0.4
3,771,822	-		LRK53_RS17145	0.13	+0.4
3,771,822	-		LRK53_RS17145	0.13	+0.7
3,771,822	-		LRK53_RS17145	0.13	-1.2
3,772,109	+		LRK53_RS17145	0.42	-3.3
3,772,109	+		LRK53_RS17145	0.42	-2.7
3,772,110	-		LRK53_RS17145	0.42	+1.1
3,772,451	+		LRK53_RS17145	0.76	+0.0
3,772,451	+		LRK53_RS17145	0.76	-0.2
3,772,514	+		LRK53_RS17145	0.82	-0.2
3,772,514	+		LRK53_RS17145	0.82	+0.5
3,772,514	+		LRK53_RS17145	0.82	-0.3
3,772,688	+				+0.0
3,772,689	-				+0.5
3,772,689	-				-1.7
3,772,689	-				-0.9
3,772,689	-				-2.2
3,772,689	-				-1.0
3,772,689	-				-0.7
3,772,689	-				-0.8
3,772,689	-				-1.2
3,772,689	-				-1.7
3,772,689	-				-0.9
3,772,689	-				+0.6
3,772,689	-				-0.9
3,772,689	-				+1.2
3,772,689	-				-0.8
3,772,689	-				-1.8
3,772,759	-				-1.2
3,772,840	+				+3.2
3,772,840	+				+0.4
3,772,840	+				-0.2
3,772,840	+				-0.5
3,772,840	+				-0.9
3,772,840	+				-1.1
3,772,840	+				-1.6
3,772,840	+				+1.2
3,772,840	+				+0.8
3,772,840	+				-0.6
3,772,840	+				-0.2
3,772,840	+				-0.1
3,772,840	+				-0.7
3,772,840	+				+0.0
3,772,840	+				-1.4
3,772,840	+				-0.6
3,772,840	+				-0.6
3,773,045	+		LRK53_RS17150	0.63	+0.2
3,773,045	+		LRK53_RS17150	0.63	-0.3
3,773,045	+		LRK53_RS17150	0.63	+0.0
3,773,045	+		LRK53_RS17150	0.63	-1.0
3,773,045	+		LRK53_RS17150	0.63	+0.8
3,773,045	+		LRK53_RS17150	0.63	-1.2
3,773,045	+		LRK53_RS17150	0.63	+0.1
3,773,046	-		LRK53_RS17150	0.63	-0.2
3,773,046	-		LRK53_RS17150	0.63	-2.1
3,773,046	-		LRK53_RS17150	0.63	-1.2
3,773,046	-		LRK53_RS17150	0.63	-0.2
3,773,046	-		LRK53_RS17150	0.63	-1.9
3,773,046	-		LRK53_RS17150	0.63	-0.3
3,773,046	-		LRK53_RS17150	0.63	-2.7
3,773,579	+		LRK53_RS17155	0.60	-1.7
3,773,579	+		LRK53_RS17155	0.60	-3.1
3,773,579	+		LRK53_RS17155	0.60	-1.3
3,773,579	+		LRK53_RS17155	0.60	+0.2
3,773,579	+		LRK53_RS17155	0.60	-0.3
3,773,579	+		LRK53_RS17155	0.60	-0.6
3,773,579	+		LRK53_RS17155	0.60	-0.5
3,773,579	+		LRK53_RS17155	0.60	-2.0
3,773,579	+		LRK53_RS17155	0.60	+0.2
3,773,579	+		LRK53_RS17155	0.60	-0.8
3,773,579	+		LRK53_RS17155	0.60	-0.4
3,773,580	-		LRK53_RS17155	0.61	+0.7
3,773,580	-		LRK53_RS17155	0.61	+0.0
3,773,580	-		LRK53_RS17155	0.61	-1.9
3,773,580	-		LRK53_RS17155	0.61	+0.0
3,773,580	-		LRK53_RS17155	0.61	-0.3
3,773,580	-		LRK53_RS17155	0.61	-3.0
3,773,580	-		LRK53_RS17155	0.61	-0.2
3,773,580	-		LRK53_RS17155	0.61	-0.0
3,773,614	+		LRK53_RS17155	0.68	+0.1
3,773,614	+		LRK53_RS17155	0.68	+0.1
3,773,614	+		LRK53_RS17155	0.68	-0.5
3,773,614	+		LRK53_RS17155	0.68	-2.0
3,773,614	+		LRK53_RS17155	0.68	-0.8
3,773,614	+		LRK53_RS17155	0.68	-1.1
3,773,614	+		LRK53_RS17155	0.68	-0.1
3,773,614	+		LRK53_RS17155	0.68	-1.4
3,773,614	+		LRK53_RS17155	0.68	-0.2
3,773,614	+		LRK53_RS17155	0.68	-0.8
3,773,614	+		LRK53_RS17155	0.68	-1.5
3,773,614	+		LRK53_RS17155	0.68	+1.4
3,773,614	+		LRK53_RS17155	0.68	-0.4
3,773,615	-		LRK53_RS17155	0.68	-0.0
3,773,615	-		LRK53_RS17155	0.68	-0.7
3,773,615	-		LRK53_RS17155	0.68	+1.2
3,773,615	-		LRK53_RS17155	0.68	-1.7
3,773,615	-		LRK53_RS17155	0.68	-0.2
3,773,615	-		LRK53_RS17155	0.68	-1.9
3,773,615	-		LRK53_RS17155	0.68	+0.2
3,773,687	+		LRK53_RS17155	0.85	-0.3
3,773,687	+		LRK53_RS17155	0.85	+0.4
3,773,687	+		LRK53_RS17155	0.85	+2.0
3,773,687	+		LRK53_RS17155	0.85	+0.6
3,773,687	+		LRK53_RS17155	0.85	-0.9
3,773,687	+		LRK53_RS17155	0.85	-0.9
3,773,687	+		LRK53_RS17155	0.85	+0.4
3,773,687	+		LRK53_RS17155	0.85	-0.5
3,773,687	+		LRK53_RS17155	0.85	+1.1
3,773,687	+		LRK53_RS17155	0.85	-1.6
3,773,687	+		LRK53_RS17155	0.85	+0.6
3,773,687	+		LRK53_RS17155	0.85	-0.6
3,773,688	-		LRK53_RS17155	0.85	-0.6
3,773,688	-		LRK53_RS17155	0.85	+1.3
3,773,688	-		LRK53_RS17155	0.85	-0.9
3,773,688	-		LRK53_RS17155	0.85	+1.8
3,773,688	-		LRK53_RS17155	0.85	+0.4
3,773,688	-		LRK53_RS17155	0.85	-0.5
3,773,688	-		LRK53_RS17155	0.85	+0.1
3,773,688	-		LRK53_RS17155	0.85	-0.5
3,773,688	-		LRK53_RS17155	0.85	-0.7
3,773,688	-		LRK53_RS17155	0.85	+0.3
3,773,688	-		LRK53_RS17155	0.85	+0.2
3,773,688	-		LRK53_RS17155	0.85	-0.3
3,773,688	-		LRK53_RS17155	0.85	-1.0