Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16615

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,657,759	+				-0.4
3,657,759	+				-0.8
3,657,759	+				-0.2
3,657,759	+				-1.1
3,658,446	-				+0.1
3,658,544	+				+1.1
3,658,544	+				-1.6
3,658,636	+				+1.3
3,658,636	+				-1.6
3,658,636	+				-1.7
3,658,636	+				-2.0
3,658,636	+				-0.7
3,658,636	+				-0.9
3,658,636	+				-0.8
3,658,636	+				+1.5
3,658,636	+				-1.7
3,658,636	+				-0.1
3,658,636	+				+0.4
3,658,636	+				-1.5
3,658,636	+				-2.8
3,658,636	+				+0.2
3,658,637	-				-0.5
3,658,637	-				-0.1
3,658,637	-				-0.7
3,658,637	-				+0.4
3,658,637	-				-1.3
3,658,637	-				-1.0
3,658,637	-				-0.1
3,658,695	+				+0.1
3,658,814	+				+0.8
3,658,864	+				-0.7
3,658,864	+				-1.7
3,658,864	+				-1.1
3,658,865	-				-0.3
3,658,972	+		LRK53_RS16615	0.17	+0.1
3,658,984	+		LRK53_RS16615	0.18	-1.4
3,658,984	+		LRK53_RS16615	0.18	-2.0
3,658,984	+		LRK53_RS16615	0.18	+0.6
3,658,985	-		LRK53_RS16615	0.18	-2.7
3,658,985	-		LRK53_RS16615	0.18	-1.1
3,659,002	+		LRK53_RS16615	0.19	-0.7
3,659,002	+		LRK53_RS16615	0.19	-2.7
3,659,002	+		LRK53_RS16615	0.19	-0.6
3,659,002	+		LRK53_RS16615	0.19	-1.5
3,659,003	-		LRK53_RS16615	0.19	-1.4
3,659,078	+		LRK53_RS16615	0.25	-0.5
3,659,078	+		LRK53_RS16615	0.25	-1.0
3,659,078	+		LRK53_RS16615	0.25	-0.4
3,659,078	+		LRK53_RS16615	0.25	-2.3
3,659,078	+		LRK53_RS16615	0.25	-2.7
3,659,079	-		LRK53_RS16615	0.25	-0.7
3,659,079	-		LRK53_RS16615	0.25	-0.0
3,659,084	-		LRK53_RS16615	0.25	-0.3
3,659,084	-		LRK53_RS16615	0.25	+0.1
3,659,201	-		LRK53_RS16615	0.33	-3.0
3,659,205	+		LRK53_RS16615	0.33	-1.0
3,659,205	+		LRK53_RS16615	0.33	+1.1
3,659,205	+		LRK53_RS16615	0.33	-0.5
3,659,205	+		LRK53_RS16615	0.33	+0.2
3,659,205	+		LRK53_RS16615	0.33	-0.6
3,659,205	+		LRK53_RS16615	0.33	-0.1
3,659,205	+		LRK53_RS16615	0.33	-0.9
3,659,205	+		LRK53_RS16615	0.33	+0.9
3,659,205	+		LRK53_RS16615	0.33	-0.3
3,659,205	+		LRK53_RS16615	0.33	-3.2
3,659,205	+		LRK53_RS16615	0.33	-0.4
3,659,206	-		LRK53_RS16615	0.34	-1.4
3,659,206	-		LRK53_RS16615	0.34	+0.4
3,659,206	-		LRK53_RS16615	0.34	-3.9
3,659,206	-		LRK53_RS16615	0.34	+1.1
3,659,206	-		LRK53_RS16615	0.34	-0.7
3,659,206	-		LRK53_RS16615	0.34	-2.3
3,659,206	-		LRK53_RS16615	0.34	-1.0
3,659,206	-		LRK53_RS16615	0.34	+0.1
3,659,300	-		LRK53_RS16615	0.40	+1.1
3,659,327	+		LRK53_RS16615	0.42	+1.0
3,659,327	+		LRK53_RS16615	0.42	-1.7
3,659,327	+		LRK53_RS16615	0.42	+0.2
3,659,327	+		LRK53_RS16615	0.42	-1.0
3,659,327	+		LRK53_RS16615	0.42	-2.6
3,659,328	-		LRK53_RS16615	0.42	-0.9
3,659,328	-		LRK53_RS16615	0.42	-0.6
3,659,328	-		LRK53_RS16615	0.42	-1.8
3,659,328	-		LRK53_RS16615	0.42	+0.4
3,659,328	-		LRK53_RS16615	0.42	-1.0
3,659,328	-		LRK53_RS16615	0.42	-2.7
3,659,441	-		LRK53_RS16615	0.50	-0.1
3,659,494	+		LRK53_RS16615	0.54	-0.1
3,659,494	+		LRK53_RS16615	0.54	-2.6
3,659,494	+		LRK53_RS16615	0.54	-1.2
3,659,494	+		LRK53_RS16615	0.54	-1.3
3,659,495	-		LRK53_RS16615	0.54	+0.2
3,659,495	-		LRK53_RS16615	0.54	-0.7
3,659,495	-		LRK53_RS16615	0.54	-0.6
3,659,495	-		LRK53_RS16615	0.54	-0.3
3,659,495	-		LRK53_RS16615	0.54	+1.4
3,659,734	+		LRK53_RS16615	0.70	-0.8
3,659,735	-		LRK53_RS16615	0.71	-0.8
3,659,735	-		LRK53_RS16615	0.71	-1.4
3,659,893	+		LRK53_RS16615	0.82	-0.8
3,659,893	+		LRK53_RS16615	0.82	-2.2
3,659,893	+		LRK53_RS16615	0.82	-0.1
3,659,894	-		LRK53_RS16615	0.82	-1.7
3,659,894	-		LRK53_RS16615	0.82	-0.5
3,659,989	+		LRK53_RS16615	0.88	+0.0
3,659,989	+		LRK53_RS16615	0.88	-0.6
3,659,989	+		LRK53_RS16615	0.88	-0.9
3,659,989	+		LRK53_RS16615	0.88	-0.1
3,659,989	+		LRK53_RS16615	0.88	-0.1
3,659,989	+		LRK53_RS16615	0.88	-1.2
3,659,989	+		LRK53_RS16615	0.88	-0.7
3,659,989	+		LRK53_RS16615	0.88	+0.6
3,659,989	+		LRK53_RS16615	0.88	+0.1
3,659,989	+		LRK53_RS16615	0.88	-2.0
3,659,989	+		LRK53_RS16615	0.88	-0.8
3,659,989	+		LRK53_RS16615	0.88	+0.2
3,659,989	+		LRK53_RS16615	0.88	-1.7
3,659,990	-		LRK53_RS16615	0.88	-0.6
3,659,990	-		LRK53_RS16615	0.88	-0.5
3,659,990	-		LRK53_RS16615	0.88	-0.7
3,659,990	-		LRK53_RS16615	0.88	-1.3
3,659,990	-		LRK53_RS16615	0.88	-0.6
3,659,990	-		LRK53_RS16615	0.88	+0.7
3,659,990	-		LRK53_RS16615	0.88	+0.3
3,660,067	+				+0.5
3,660,067	+				-0.7
3,660,067	+				+0.3
3,660,068	-				-0.5
3,660,068	-				-1.4
3,660,068	-				-1.2
3,660,082	+				-1.2
3,660,082	+				-2.0
3,660,082	+				+0.1
3,660,082	+				+0.2
3,660,083	-				+0.5
3,660,083	-				+0.3
3,660,083	-				+0.9
3,660,083	-				-0.3
3,660,083	-				-0.9
3,660,154	+				-1.3
3,660,288	+				-0.9
3,660,288	+				-1.0
3,660,288	+				-2.1
3,660,288	+				+0.1
3,660,288	+				-1.3
3,660,288	+				+0.5
3,660,288	+				-0.7
3,660,289	-				-0.8
3,660,289	-				+0.4
3,660,289	-				-2.2
3,660,289	-				-0.3
3,660,289	-				-0.1
3,660,289	-				-0.8
3,660,297	+				-1.7
3,660,297	+				-1.0
3,660,297	+				+0.1
3,660,297	+				+1.4
3,660,297	+				-0.0
3,660,297	+				+1.0
3,660,297	+				+0.4
3,660,297	+				-2.0
3,660,298	-				+0.3
3,660,298	-				+0.7
3,660,300	+				-0.8
3,660,300	+				-2.3
3,660,300	+				-0.9
3,660,300	+				-1.4
3,660,300	+				-1.4
3,660,301	-				+1.0
3,660,301	-				-0.5
3,660,301	-				-2.0
3,660,301	-				-1.6
3,660,301	-				-0.4
3,660,301	-				+0.1
3,660,301	-				+1.1
3,660,301	-				-0.8
3,660,301	-				-0.8
3,660,301	-				-0.6
3,660,301	-				-0.2
3,660,429	+		LRK53_RS16620	0.37	+0.4
3,660,429	+		LRK53_RS16620	0.37	-1.8
3,660,450	+		LRK53_RS16620	0.42	-0.8
3,660,450	+		LRK53_RS16620	0.42	+0.7
3,660,450	+		LRK53_RS16620	0.42	-0.5
3,660,450	+		LRK53_RS16620	0.42	-1.0
3,660,451	-		LRK53_RS16620	0.43	-1.4
3,660,451	-		LRK53_RS16620	0.43	-0.2
3,660,451	-		LRK53_RS16620	0.43	-1.1
3,660,451	-		LRK53_RS16620	0.43	+0.8
3,660,451	-		LRK53_RS16620	0.43	-1.5
3,660,451	-		LRK53_RS16620	0.43	-0.3
3,660,451	-		LRK53_RS16620	0.43	-1.1
3,660,526	+		LRK53_RS16620	0.62	-1.1
3,660,526	+		LRK53_RS16620	0.62	+0.5
3,660,526	+		LRK53_RS16620	0.62	-1.4
3,660,526	+		LRK53_RS16620	0.62	+0.7
3,660,526	+		LRK53_RS16620	0.62	-0.0
3,660,526	+		LRK53_RS16620	0.62	-3.3
3,660,526	+		LRK53_RS16620	0.62	+2.3
3,660,526	+		LRK53_RS16620	0.62	-0.1
3,660,527	-		LRK53_RS16620	0.62	-0.5
3,660,527	-		LRK53_RS16620	0.62	-1.2
3,660,527	-		LRK53_RS16620	0.62	-1.6
3,660,527	-		LRK53_RS16620	0.62	-0.1
3,660,527	-		LRK53_RS16620	0.62	-0.1
3,660,527	-		LRK53_RS16620	0.62	+0.6
3,660,527	-		LRK53_RS16620	0.62	+0.1
3,660,527	-		LRK53_RS16620	0.62	-1.5
3,660,527	-		LRK53_RS16620	0.62	-1.0
3,660,527	-		LRK53_RS16620	0.62	-2.3
3,660,527	-		LRK53_RS16620	0.62	-0.7
3,660,527	-		LRK53_RS16620	0.62	-2.1
3,660,527	-		LRK53_RS16620	0.62	-0.5
3,660,641	+				+1.5
3,660,641	+				-2.3
3,660,642	-				-0.1
3,660,642	-				-0.8
3,660,642	-				+0.3
3,660,642	-				-1.2
3,660,642	-				-1.0
3,660,642	-				-0.3
3,660,642	-				-0.0
3,660,642	-				-1.1
3,660,642	-				-0.3
3,660,642	-				+1.3
3,660,702	+				-0.7
3,660,703	-				-0.2
3,660,703	-				-0.2
3,660,703	-				+0.2
3,660,703	-				-1.5
3,660,703	-				-0.5
3,660,703	-				+0.4
3,660,730	+				-0.9
3,660,730	+				-1.8
3,660,730	+				+0.1
3,660,730	+				-0.4
3,660,730	+				+3.2
3,660,730	+				-0.5
3,660,730	+				-1.8
3,660,731	-				-2.6
3,660,731	-				-0.4
3,660,731	-				+0.3
3,660,731	-				+0.9
3,660,731	-				-0.7
3,660,731	-				+0.5
3,660,731	-				-0.1
3,660,731	-				-1.8
3,660,793	+				-1.1
3,660,793	+				+1.4
3,660,793	+				-0.9
3,660,793	+				+1.0
3,660,793	+				-0.7
3,660,793	+				+0.1
3,660,793	+				-0.6
3,660,793	+				-0.3
3,660,793	+				-0.1
3,660,793	+				-1.7
3,660,793	+				+0.4
3,660,794	-				+0.9
3,660,794	-				-1.3
3,660,794	-				-0.5
3,660,794	-				-0.7
3,660,794	-				-0.1
3,660,794	-				-0.8
3,660,794	-				-0.9
3,660,794	-				-0.3
3,660,794	-				+0.1
3,660,794	-				+0.4
3,660,811	+				-0.8
3,660,811	+				-0.8
3,660,811	+				-0.9
3,660,811	+				-1.3
3,660,811	+				-0.1
3,660,812	-				+0.1
3,660,812	-				-0.6
3,660,873	+		LRK53_RS16625	0.26	-0.9
3,660,874	-		LRK53_RS16625	0.26	+0.9
3,660,874	-		LRK53_RS16625	0.26	+1.1
3,660,915	-		LRK53_RS16625	0.39	+1.2
3,660,998	+		LRK53_RS16625	0.64	-2.1
3,660,998	+		LRK53_RS16625	0.64	-0.6
3,660,998	+		LRK53_RS16625	0.64	+1.0
3,660,998	+		LRK53_RS16625	0.64	-1.3
3,660,998	+		LRK53_RS16625	0.64	+0.3
3,660,999	-		LRK53_RS16625	0.64	-0.1
3,660,999	-		LRK53_RS16625	0.64	-0.4
3,660,999	-		LRK53_RS16625	0.64	+1.9
3,660,999	-		LRK53_RS16625	0.64	-1.0
3,660,999	-		LRK53_RS16625	0.64	+0.0
3,660,999	-		LRK53_RS16625	0.64	+0.0
3,660,999	-		LRK53_RS16625	0.64	-0.5
3,660,999	-		LRK53_RS16625	0.64	-1.3
3,660,999	-		LRK53_RS16625	0.64	+0.3
3,660,999	-		LRK53_RS16625	0.64	+0.1
3,660,999	-		LRK53_RS16625	0.64	-0.1
3,660,999	-		LRK53_RS16625	0.64	+0.6
3,660,999	-		LRK53_RS16625	0.64	-1.4
3,661,155	+				+0.5
3,661,156	-				+1.0
3,661,156	-				+1.3
3,661,156	-				-1.3