Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14625

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,205,136	-		LRK53_RS14620	0.81	-0.1
3,205,187	+		LRK53_RS14620	0.82	-1.4
3,205,187	+		LRK53_RS14620	0.82	-2.4
3,205,187	+		LRK53_RS14620	0.82	+0.5
3,205,187	+		LRK53_RS14620	0.82	+1.0
3,205,187	+		LRK53_RS14620	0.82	-1.7
3,205,188	-		LRK53_RS14620	0.82	+1.9
3,205,188	-		LRK53_RS14620	0.82	-0.4
3,205,196	+		LRK53_RS14620	0.83	-1.4
3,205,196	+		LRK53_RS14620	0.83	-1.1
3,205,196	+		LRK53_RS14620	0.83	+0.1
3,205,196	+		LRK53_RS14620	0.83	-0.4
3,205,196	+		LRK53_RS14620	0.83	-0.5
3,205,196	+		LRK53_RS14620	0.83	-0.9
3,205,197	-		LRK53_RS14620	0.83	+0.1
3,205,197	-		LRK53_RS14620	0.83	-0.6
3,205,197	-		LRK53_RS14620	0.83	-0.6
3,205,197	-		LRK53_RS14620	0.83	-1.5
3,205,197	-		LRK53_RS14620	0.83	-0.8
3,205,197	-		LRK53_RS14620	0.83	+0.9
3,205,197	-		LRK53_RS14620	0.83	-2.2
3,205,197	-		LRK53_RS14620	0.83	-1.1
3,205,232	+		LRK53_RS14620	0.84	+0.6
3,205,232	+		LRK53_RS14620	0.84	+0.8
3,205,251	-		LRK53_RS14620	0.84	+0.0
3,205,403	+		LRK53_RS14620	0.88	-1.6
3,205,403	+		LRK53_RS14620	0.88	-0.7
3,205,403	+		LRK53_RS14620	0.88	-1.4
3,205,403	+		LRK53_RS14620	0.88	+0.9
3,205,404	-		LRK53_RS14620	0.88	-0.8
3,205,404	-		LRK53_RS14620	0.88	-0.1
3,205,404	-		LRK53_RS14620	0.88	-0.6
3,205,404	-		LRK53_RS14620	0.88	-1.2
3,205,404	-		LRK53_RS14620	0.88	-2.0
3,205,404	-		LRK53_RS14620	0.88	-1.7
3,205,514	+				-0.3
3,205,535	+				-1.4
3,205,535	+				-1.8
3,205,535	+				-1.7
3,205,535	+				+1.7
3,205,535	+				-0.3
3,205,536	-				-0.1
3,205,536	-				-0.1
3,205,536	-				+0.1
3,205,536	-				-1.2
3,205,536	-				-0.0
3,205,541	+				-0.1
3,205,541	+				-0.1
3,205,541	+				+0.0
3,205,541	+				-2.6
3,205,542	-				-1.3
3,205,542	-				-1.7
3,205,542	-				+0.7
3,205,550	+				-2.8
3,205,550	+				-0.8
3,205,550	+				-1.6
3,205,550	+				+0.1
3,205,550	+				+1.3
3,205,550	+				+0.8
3,205,550	+				-1.0
3,205,551	-				+2.0
3,205,551	-				+1.5
3,205,551	-				-0.3
3,205,551	-				-0.7
3,205,551	-				+1.0
3,205,551	-				-0.6
3,205,551	-				-1.5
3,205,551	-				-0.8
3,205,551	-				-1.2
3,205,658	+				-3.6
3,205,658	+				-0.9
3,205,658	+				-0.4
3,205,658	+				-0.1
3,205,658	+				-0.7
3,205,658	+				-0.7
3,205,658	+				-3.4
3,205,658	+				-1.0
3,205,658	+				+0.7
3,205,658	+				-0.5
3,205,659	-				+1.2
3,205,659	-				-1.8
3,205,659	-				-2.1
3,205,838	+				-2.0
3,205,838	+				-1.2
3,205,838	+				-0.1
3,205,838	+				-1.1
3,205,838	+				+0.0
3,205,838	+				-1.3
3,205,838	+				+2.4
3,205,838	+				-0.9
3,205,838	+				-0.8
3,205,838	+				-3.3
3,205,838	+				+0.3
3,205,838	+				-0.4
3,205,839	-				-0.3
3,205,839	-				-1.4
3,205,839	-				+0.2
3,205,839	-				-0.9
3,205,839	-				-2.4
3,205,927	+				-0.8
3,205,928	-				-0.3
3,205,928	-				-0.3
3,205,928	-				+2.5
3,205,928	-				+1.1
3,205,928	-				-0.0
3,206,272	+		LRK53_RS14625	0.38	-1.8
3,206,272	+		LRK53_RS14625	0.38	-2.5
3,206,272	+		LRK53_RS14625	0.38	+1.3
3,206,272	+		LRK53_RS14625	0.38	-0.6
3,206,272	+		LRK53_RS14625	0.38	-0.5
3,206,272	+		LRK53_RS14625	0.38	-0.8
3,206,272	+		LRK53_RS14625	0.38	-0.7
3,206,272	+		LRK53_RS14625	0.38	-1.8
3,206,272	+		LRK53_RS14625	0.38	+0.7
3,206,272	+		LRK53_RS14625	0.38	-0.4
3,206,272	+		LRK53_RS14625	0.38	-2.9
3,206,272	+		LRK53_RS14625	0.38	-1.3
3,206,273	-		LRK53_RS14625	0.39	-1.2
3,206,273	-		LRK53_RS14625	0.39	-1.2
3,206,273	-		LRK53_RS14625	0.39	+0.7
3,206,273	-		LRK53_RS14625	0.39	-0.7
3,206,273	-		LRK53_RS14625	0.39	-0.4
3,206,273	-		LRK53_RS14625	0.39	-2.2
3,206,273	-		LRK53_RS14625	0.39	-0.7
3,206,273	-		LRK53_RS14625	0.39	-1.3
3,206,273	-		LRK53_RS14625	0.39	-0.7
3,206,273	-		LRK53_RS14625	0.39	-2.0
3,206,273	-		LRK53_RS14625	0.39	+0.7
3,206,273	-		LRK53_RS14625	0.39	-1.8
3,206,273	-		LRK53_RS14625	0.39	-0.4
3,206,273	-		LRK53_RS14625	0.39	-1.4
3,206,273	-		LRK53_RS14625	0.39	-0.3
3,206,273	-		LRK53_RS14625	0.39	-0.4
3,206,273	-		LRK53_RS14625	0.39	-0.9
3,206,273	-		LRK53_RS14625	0.39	-1.3
3,206,708	+		LRK53_RS14630	0.38	-0.9
3,206,708	+		LRK53_RS14630	0.38	+1.3
3,206,708	+		LRK53_RS14630	0.38	+1.2
3,206,708	+		LRK53_RS14630	0.38	+0.8
3,206,708	+		LRK53_RS14630	0.38	-0.2
3,206,709	-		LRK53_RS14630	0.38	-1.5
3,206,709	-		LRK53_RS14630	0.38	-2.2
3,206,709	-		LRK53_RS14630	0.38	-1.3
3,206,709	-		LRK53_RS14630	0.38	+1.5
3,206,787	-		LRK53_RS14630	0.51	-0.4
3,206,787	-		LRK53_RS14630	0.51	-0.4
3,206,793	+		LRK53_RS14630	0.52	-0.2
3,206,793	+		LRK53_RS14630	0.52	-1.2
3,206,793	+		LRK53_RS14630	0.52	-0.5
3,206,793	+		LRK53_RS14630	0.52	-1.2
3,206,793	+		LRK53_RS14630	0.52	-0.5
3,206,793	+		LRK53_RS14630	0.52	-1.4
3,206,793	+		LRK53_RS14630	0.52	-1.8
3,206,793	+		LRK53_RS14630	0.52	-0.3
3,206,793	+		LRK53_RS14630	0.52	+0.3
3,206,793	+		LRK53_RS14630	0.52	-0.7
3,206,793	+		LRK53_RS14630	0.52	+0.0
3,206,793	+		LRK53_RS14630	0.52	-0.4
3,206,793	+		LRK53_RS14630	0.52	-0.0
3,206,793	+		LRK53_RS14630	0.52	-0.5
3,206,793	+		LRK53_RS14630	0.52	-1.3
3,206,793	+		LRK53_RS14630	0.52	-1.6
3,206,793	+		LRK53_RS14630	0.52	+2.2
3,206,793	+		LRK53_RS14630	0.52	-0.1
3,206,793	+		LRK53_RS14630	0.52	-0.3
3,206,794	-		LRK53_RS14630	0.53	-1.0
3,206,794	-		LRK53_RS14630	0.53	+0.4
3,206,794	-		LRK53_RS14630	0.53	-2.9
3,206,794	-		LRK53_RS14630	0.53	-1.2
3,206,794	-		LRK53_RS14630	0.53	-0.1
3,206,794	-		LRK53_RS14630	0.53	-0.5
3,206,794	-		LRK53_RS14630	0.53	-0.2
3,206,794	-		LRK53_RS14630	0.53	-1.4
3,206,794	-		LRK53_RS14630	0.53	-1.1
3,206,794	-		LRK53_RS14630	0.53	-0.8
3,206,794	-		LRK53_RS14630	0.53	-0.4
3,206,794	-		LRK53_RS14630	0.53	+2.5
3,207,151	+		LRK53_RS14635	0.21	-0.6
3,207,151	+		LRK53_RS14635	0.21	-0.4
3,207,151	+		LRK53_RS14635	0.21	+0.6
3,207,151	+		LRK53_RS14635	0.21	-1.4
3,207,151	+		LRK53_RS14635	0.21	-0.4
3,207,151	+		LRK53_RS14635	0.21	-0.1
3,207,152	-		LRK53_RS14635	0.21	-0.5
3,207,152	-		LRK53_RS14635	0.21	-0.6
3,207,152	-		LRK53_RS14635	0.21	-1.0
3,207,152	-		LRK53_RS14635	0.21	-1.1
3,207,152	-		LRK53_RS14635	0.21	-0.9
3,207,152	-		LRK53_RS14635	0.21	-1.4
3,207,301	+		LRK53_RS14635	0.50	+0.1
3,207,301	+		LRK53_RS14635	0.50	+0.0
3,207,301	+		LRK53_RS14635	0.50	-1.7
3,207,301	+		LRK53_RS14635	0.50	-1.6
3,207,301	+		LRK53_RS14635	0.50	-0.2
3,207,301	+		LRK53_RS14635	0.50	-0.8
3,207,301	+		LRK53_RS14635	0.50	+0.1
3,207,301	+		LRK53_RS14635	0.50	+0.9
3,207,302	-		LRK53_RS14635	0.51	+0.0
3,207,302	-		LRK53_RS14635	0.51	-1.1
3,207,302	-		LRK53_RS14635	0.51	+0.3
3,207,302	-		LRK53_RS14635	0.51	-2.1
3,207,302	-		LRK53_RS14635	0.51	-3.0
3,207,302	-		LRK53_RS14635	0.51	-0.8
3,207,302	-		LRK53_RS14635	0.51	-2.1
3,207,302	-		LRK53_RS14635	0.51	-0.8
3,207,302	-		LRK53_RS14635	0.51	-0.4
3,207,302	-		LRK53_RS14635	0.51	-0.7
3,207,302	-		LRK53_RS14635	0.51	+0.4
3,207,302	-		LRK53_RS14635	0.51	-0.7
3,207,388	+		LRK53_RS14635	0.68	+0.5
3,207,388	+		LRK53_RS14635	0.68	-1.0
3,207,388	+		LRK53_RS14635	0.68	-1.2
3,207,389	-		LRK53_RS14635	0.68	-1.3