Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12920

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,857,335	-		LRK53_RS12915	0.67	-0.1
2,857,340	+		LRK53_RS12915	0.67	-1.6
2,857,340	+		LRK53_RS12915	0.67	-0.5
2,857,340	+		LRK53_RS12915	0.67	+0.3
2,857,340	+		LRK53_RS12915	0.67	-0.1
2,857,341	-		LRK53_RS12915	0.67	-1.4
2,857,341	-		LRK53_RS12915	0.67	-0.3
2,857,341	-		LRK53_RS12915	0.67	+0.2
2,857,341	-		LRK53_RS12915	0.67	-0.1
2,857,341	-		LRK53_RS12915	0.67	-1.1
2,857,341	-		LRK53_RS12915	0.67	-2.1
2,857,341	-		LRK53_RS12915	0.67	-2.5
2,857,389	-		LRK53_RS12915	0.69	-0.3
2,857,389	-		LRK53_RS12915	0.69	-0.8
2,857,389	-		LRK53_RS12915	0.69	-0.9
2,857,421	-		LRK53_RS12915	0.70	-1.0
2,857,766	+		LRK53_RS12915	0.83	-1.2
2,857,766	+		LRK53_RS12915	0.83	-0.9
2,857,766	+		LRK53_RS12915	0.83	+0.8
2,857,766	+		LRK53_RS12915	0.83	+0.2
2,857,766	+		LRK53_RS12915	0.83	-0.7
2,857,767	-		LRK53_RS12915	0.83	-1.2
2,857,767	-		LRK53_RS12915	0.83	+0.4
2,857,767	-		LRK53_RS12915	0.83	-1.4
2,857,767	-		LRK53_RS12915	0.83	-1.0
2,857,767	-		LRK53_RS12915	0.83	-0.3
2,857,767	-		LRK53_RS12915	0.83	-0.2
2,857,767	-		LRK53_RS12915	0.83	-0.8
2,858,024	+				-0.4
2,858,221	+				-0.8
2,858,222	-				+0.4
2,858,245	+				+0.8
2,858,245	+				+0.1
2,858,245	+				+0.1
2,858,246	-				+0.6
2,858,246	-				-1.4
2,858,246	-				-0.4
2,858,246	-				+1.9
2,858,246	-				-2.3
2,858,246	-				-0.9
2,858,246	-				-0.7
2,858,246	-				+0.1
2,858,346	+				-1.6
2,858,346	+				-1.6
2,858,346	+				+1.4
2,858,346	+				-0.9
2,858,346	+				-0.1
2,858,346	+				-2.6
2,858,346	+				-0.9
2,858,347	-				-0.1
2,858,347	-				+1.7
2,858,347	-				-0.1
2,858,347	-				-0.0
2,858,379	+				-0.8
2,858,379	+				-1.8
2,858,379	+				-0.4
2,858,379	+				-1.0
2,858,379	+				-0.5
2,858,379	+				+0.5
2,858,379	+				-0.2
2,858,379	+				-1.3
2,858,379	+				-1.1
2,858,380	-				-1.3
2,858,380	-				-0.1
2,858,380	-				-0.5
2,858,380	-				-0.7
2,858,380	-				+0.5
2,858,380	-				-0.3
2,858,380	-				-2.2
2,858,394	+				-0.4
2,858,394	+				+0.5
2,858,395	-				-1.6
2,858,395	-				-0.5
2,858,395	-				-2.0
2,858,395	-				-0.5
2,858,481	+		LRK53_RS12920	0.13	+1.0
2,858,481	+		LRK53_RS12920	0.13	-1.0
2,858,481	+		LRK53_RS12920	0.13	-1.8
2,858,482	-		LRK53_RS12920	0.13	-2.3
2,858,482	-		LRK53_RS12920	0.13	-0.5
2,858,482	-		LRK53_RS12920	0.13	-1.9
2,858,482	-		LRK53_RS12920	0.13	-0.1
2,858,598	+		LRK53_RS12920	0.20	-0.3
2,858,598	+		LRK53_RS12920	0.20	-1.4
2,858,598	+		LRK53_RS12920	0.20	-0.0
2,858,598	+		LRK53_RS12920	0.20	-1.4
2,858,598	+		LRK53_RS12920	0.20	-2.7
2,858,598	+		LRK53_RS12920	0.20	-1.4
2,858,598	+		LRK53_RS12920	0.20	-1.4
2,858,598	+		LRK53_RS12920	0.20	-1.3
2,858,599	-		LRK53_RS12920	0.20	+0.2
2,858,599	-		LRK53_RS12920	0.20	-0.4
2,858,599	-		LRK53_RS12920	0.20	-1.4
2,858,599	-		LRK53_RS12920	0.20	-0.0
2,858,599	-		LRK53_RS12920	0.20	-0.1
2,858,599	-		LRK53_RS12920	0.20	-2.2
2,858,599	-		LRK53_RS12920	0.20	-1.6
2,858,599	-		LRK53_RS12920	0.20	-0.1
2,858,599	-		LRK53_RS12920	0.20	-1.8
2,858,599	-		LRK53_RS12920	0.20	-0.8
2,858,599	-		LRK53_RS12920	0.20	-1.1
2,858,599	-		LRK53_RS12920	0.20	-2.0
2,858,599	-		LRK53_RS12920	0.20	+0.5
2,858,793	+		LRK53_RS12920	0.31	-1.2
2,858,793	+		LRK53_RS12920	0.31	+0.9
2,858,793	+		LRK53_RS12920	0.31	-0.8
2,858,794	-		LRK53_RS12920	0.31	-1.6
2,858,796	+		LRK53_RS12920	0.31	-0.5
2,858,796	+		LRK53_RS12920	0.31	-0.3
2,858,796	+		LRK53_RS12920	0.31	+0.2
2,858,796	+		LRK53_RS12920	0.31	-1.9
2,858,796	+		LRK53_RS12920	0.31	-0.4
2,858,796	+		LRK53_RS12920	0.31	-0.3
2,858,796	+		LRK53_RS12920	0.31	-0.8
2,858,796	+		LRK53_RS12920	0.31	-1.1
2,858,796	+		LRK53_RS12920	0.31	-2.2
2,858,796	+		LRK53_RS12920	0.31	+0.2
2,858,796	+		LRK53_RS12920	0.31	+0.7
2,858,797	-		LRK53_RS12920	0.31	-1.0
2,858,797	-		LRK53_RS12920	0.31	+2.0
2,858,797	-		LRK53_RS12920	0.31	-1.6
2,858,940	+		LRK53_RS12920	0.40	+1.7
2,858,940	+		LRK53_RS12920	0.40	+0.4
2,858,940	+		LRK53_RS12920	0.40	-1.6
2,858,940	+		LRK53_RS12920	0.40	-1.8
2,858,941	-		LRK53_RS12920	0.40	-0.1
2,858,941	-		LRK53_RS12920	0.40	-0.3
2,858,941	-		LRK53_RS12920	0.40	-0.5
2,858,941	-		LRK53_RS12920	0.40	-1.0
2,858,997	+		LRK53_RS12920	0.43	-0.6
2,858,997	+		LRK53_RS12920	0.43	-1.1
2,858,997	+		LRK53_RS12920	0.43	-0.8
2,858,997	+		LRK53_RS12920	0.43	-0.4
2,858,997	+		LRK53_RS12920	0.43	-0.3
2,858,997	+		LRK53_RS12920	0.43	-0.1
2,858,997	+		LRK53_RS12920	0.43	-0.6
2,858,998	-		LRK53_RS12920	0.43	-0.9
2,858,998	-		LRK53_RS12920	0.43	+0.1
2,858,998	-		LRK53_RS12920	0.43	-0.9
2,858,998	-		LRK53_RS12920	0.43	+0.4
2,858,998	-		LRK53_RS12920	0.43	-0.7
2,859,021	+		LRK53_RS12920	0.45	-1.6
2,859,021	+		LRK53_RS12920	0.45	-0.9
2,859,021	+		LRK53_RS12920	0.45	-2.3
2,859,021	+		LRK53_RS12920	0.45	-0.5
2,859,021	+		LRK53_RS12920	0.45	-2.2
2,859,021	+		LRK53_RS12920	0.45	-0.6
2,859,021	+		LRK53_RS12920	0.45	-0.6
2,859,021	+		LRK53_RS12920	0.45	-0.5
2,859,021	+		LRK53_RS12920	0.45	-1.3
2,859,021	+		LRK53_RS12920	0.45	-0.5
2,859,021	+		LRK53_RS12920	0.45	+1.1
2,859,022	-		LRK53_RS12920	0.45	+0.1
2,859,022	-		LRK53_RS12920	0.45	+0.7
2,859,022	-		LRK53_RS12920	0.45	-1.5
2,859,022	-		LRK53_RS12920	0.45	-1.2
2,859,022	-		LRK53_RS12920	0.45	-1.0
2,859,022	-		LRK53_RS12920	0.45	-0.3
2,859,022	-		LRK53_RS12920	0.45	+0.5
2,859,022	-		LRK53_RS12920	0.45	-0.4
2,859,022	-		LRK53_RS12920	0.45	+1.3
2,859,022	-		LRK53_RS12920	0.45	-1.3
2,859,022	-		LRK53_RS12920	0.45	-0.2
2,859,022	-		LRK53_RS12920	0.45	-2.3
2,859,022	-		LRK53_RS12920	0.45	-0.6
2,859,369	+		LRK53_RS12920	0.65	-1.0
2,859,369	+		LRK53_RS12920	0.65	-0.2
2,859,369	+		LRK53_RS12920	0.65	-0.3
2,859,370	-		LRK53_RS12920	0.65	-1.0
2,859,370	-		LRK53_RS12920	0.65	-2.8
2,859,370	-		LRK53_RS12920	0.65	-0.0
2,859,370	-		LRK53_RS12920	0.65	-0.6
2,859,370	-		LRK53_RS12920	0.65	-0.3
2,859,370	-		LRK53_RS12920	0.65	-0.2
2,859,376	-		LRK53_RS12920	0.66	-1.5
2,859,376	-		LRK53_RS12920	0.66	-0.6
2,859,391	-		LRK53_RS12920	0.66	-1.4
2,859,665	-		LRK53_RS12920	0.83	+1.1
2,859,995	-				-0.2
2,859,995	-				-0.9
2,860,068	+				-1.2
2,860,103	+				-0.6
2,860,103	+				-0.7
2,860,103	+				-0.8
2,860,103	+				+0.5
2,860,104	-				+0.5
2,860,104	-				-0.8
2,860,142	+				-0.3
2,860,142	+				-1.2
2,860,142	+				+0.1
2,860,142	+				-0.0
2,860,142	+				+0.7
2,860,143	-				-0.6
2,860,143	-				-2.3
2,860,143	-				-1.9
2,860,275	+		LRK53_RS12925	0.11	+0.1
2,860,275	+		LRK53_RS12925	0.11	+0.1
2,860,276	-		LRK53_RS12925	0.11	-1.9
2,860,276	-		LRK53_RS12925	0.11	-0.6
2,860,276	-		LRK53_RS12925	0.11	-0.6
2,860,427	-		LRK53_RS12925	0.20	-0.2
2,860,515	-		LRK53_RS12925	0.25	+0.7
2,860,515	-		LRK53_RS12925	0.25	-0.5
2,860,651	+		LRK53_RS12925	0.33	-0.5
2,860,652	-		LRK53_RS12925	0.33	+0.4
2,860,652	-		LRK53_RS12925	0.33	+0.7
2,860,672	-		LRK53_RS12925	0.34	-0.8
2,860,672	-		LRK53_RS12925	0.34	+0.1
2,860,672	-		LRK53_RS12925	0.34	+0.7
2,860,673	+		LRK53_RS12925	0.34	+0.5
2,860,673	+		LRK53_RS12925	0.34	+0.7
2,860,673	+		LRK53_RS12925	0.34	-1.1
2,860,673	+		LRK53_RS12925	0.34	-0.8
2,860,673	+		LRK53_RS12925	0.34	-0.5
2,860,673	+		LRK53_RS12925	0.34	-1.4
2,860,673	+		LRK53_RS12925	0.34	-1.6
2,860,674	-		LRK53_RS12925	0.34	+0.4
2,860,674	-		LRK53_RS12925	0.34	+0.2
2,860,674	-		LRK53_RS12925	0.34	-0.8
2,860,674	-		LRK53_RS12925	0.34	+1.5
2,860,674	-		LRK53_RS12925	0.34	+0.8
2,860,674	-		LRK53_RS12925	0.34	-0.3
2,860,674	-		LRK53_RS12925	0.34	-0.5
2,860,722	+		LRK53_RS12925	0.37	-0.3
2,860,723	-		LRK53_RS12925	0.37	-0.5
2,860,723	-		LRK53_RS12925	0.37	-0.1
2,860,723	-		LRK53_RS12925	0.37	-0.3
2,860,723	-		LRK53_RS12925	0.37	-2.6
2,860,774	+		LRK53_RS12925	0.40	-0.1
2,860,774	+		LRK53_RS12925	0.40	-1.7
2,860,774	+		LRK53_RS12925	0.40	-1.2
2,860,774	+		LRK53_RS12925	0.40	-0.5
2,860,775	-		LRK53_RS12925	0.40	-1.0
2,860,775	-		LRK53_RS12925	0.40	-0.4
2,860,796	+		LRK53_RS12925	0.41	-0.9
2,860,850	+		LRK53_RS12925	0.44	-0.3
2,860,850	+		LRK53_RS12925	0.44	-0.9
2,860,850	+		LRK53_RS12925	0.44	+1.3
2,860,851	-		LRK53_RS12925	0.44	-0.8
2,860,851	-		LRK53_RS12925	0.44	-1.1
2,860,851	-		LRK53_RS12925	0.44	-0.5
2,860,851	-		LRK53_RS12925	0.44	+0.1
2,860,851	-		LRK53_RS12925	0.44	-0.6
2,860,851	-		LRK53_RS12925	0.44	+0.2
2,860,851	-		LRK53_RS12925	0.44	-0.6
2,860,907	+		LRK53_RS12925	0.48	+0.3
2,860,907	+		LRK53_RS12925	0.48	+1.2
2,860,908	-		LRK53_RS12925	0.48	-1.8
2,860,943	+		LRK53_RS12925	0.50	+1.5
2,860,943	+		LRK53_RS12925	0.50	+0.4
2,860,943	+		LRK53_RS12925	0.50	-1.9
2,860,944	-		LRK53_RS12925	0.50	-1.1
2,860,944	-		LRK53_RS12925	0.50	-1.3
2,860,944	-		LRK53_RS12925	0.50	+0.2
2,860,944	-		LRK53_RS12925	0.50	-1.0
2,860,945	+		LRK53_RS12925	0.50	-0.6
2,860,945	+		LRK53_RS12925	0.50	+0.7
2,860,945	+		LRK53_RS12925	0.50	-0.4
2,860,946	-		LRK53_RS12925	0.50	+1.5