Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10690

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,387,616	+		LRK53_RS10680	0.78	-1.0
2,387,616	+		LRK53_RS10680	0.78	+0.2
2,387,616	+		LRK53_RS10680	0.78	-1.8
2,387,616	+		LRK53_RS10680	0.78	-2.2
2,387,616	+		LRK53_RS10680	0.78	-1.7
2,387,617	-		LRK53_RS10680	0.78	-0.4
2,387,617	-		LRK53_RS10680	0.78	-1.8
2,387,617	-		LRK53_RS10680	0.78	-0.6
2,387,734	-				-0.6
2,387,734	-				-0.7
2,387,734	-				-0.7
2,387,734	-				-0.8
2,387,734	-				-1.1
2,387,734	-				-0.0
2,387,734	-				+0.2
2,387,734	-				-0.9
2,387,734	-				-0.6
2,387,734	-				-2.6
2,387,734	-				-1.9
2,387,734	-				-0.6
2,387,734	-				-1.7
2,387,734	-				-1.0
2,387,734	-				-1.1
2,387,734	-				-0.9
2,387,734	-				-1.2
2,387,734	-				+1.6
2,387,734	-				-0.8
2,387,734	-				-1.9
2,387,734	-				-0.6
2,387,734	-				+0.4
2,387,734	-				+0.3
2,387,734	-				+0.1
2,387,734	-				-2.3
2,387,734	-				-0.4
2,387,734	-				-2.1
2,387,734	-				-0.1
2,387,734	-				-1.2
2,387,734	-				+1.1
2,387,734	-				-0.9
2,387,740	+				+1.2
2,387,740	+				+1.1
2,387,740	+				-1.1
2,387,740	+				-0.0
2,387,740	+				+0.0
2,387,740	+				+1.8
2,387,740	+				+0.6
2,387,741	-				-1.4
2,387,741	-				-0.4
2,387,741	-				-0.4
2,387,741	-				-1.4
2,387,741	-				-1.5
2,387,758	+				-0.0
2,387,758	+				+1.7
2,387,759	-				-1.8
2,387,759	-				-1.5
2,387,831	+				-1.0
2,387,831	+				+0.0
2,387,831	+				-2.1
2,387,831	+				-1.8
2,387,831	+				-1.4
2,387,831	+				-1.7
2,387,831	+				-0.0
2,387,831	+				-0.3
2,387,831	+				-1.9
2,387,831	+				-1.7
2,387,831	+				+0.3
2,387,831	+				-1.1
2,387,831	+				+0.7
2,387,831	+				-2.8
2,387,831	+				-0.4
2,387,831	+				+1.0
2,387,832	-				+0.1
2,387,832	-				+0.7
2,387,832	-				-0.9
2,387,832	-				+0.7
2,387,832	-				-0.1
2,387,832	-				+1.0
2,387,832	-				-0.9
2,387,832	-				-0.5
2,387,842	-				-0.2
2,387,852	-				-0.3
2,387,852	-				+2.0
2,387,852	-				-0.1
2,387,911	+				+0.5
2,387,911	+				-0.6
2,387,912	-				-1.4
2,387,912	-				-0.2
2,387,912	-				-0.0
2,387,912	-				-0.4
2,387,912	-				-1.1
2,387,912	-				-0.2
2,387,912	-				+0.2
2,387,912	-				+0.6
2,387,912	-				-0.3
2,387,917	+				+0.4
2,387,917	+				-1.0
2,387,917	+				-0.4
2,387,918	-				-0.3
2,387,918	-				+0.5
2,387,918	-				+0.1
2,387,918	-				-0.0
2,387,918	-				-1.8
2,387,918	-				-0.7
2,387,918	-				+2.6
2,387,918	-				-0.9
2,387,918	-				-1.2
2,387,918	-				-0.7
2,387,918	-				+0.1
2,387,918	-				-0.5
2,387,918	-				-0.6
2,388,006	-				-0.4
2,388,006	-				-2.0
2,388,006	-				-0.3
2,388,027	+				-0.4
2,388,027	+				+2.6
2,388,027	+				+0.3
2,388,027	+				-1.7
2,388,027	+				-1.0
2,388,027	+				-0.0
2,388,027	+				-0.0
2,388,027	+				-0.9
2,388,027	+				+0.8
2,388,027	+				-0.0
2,388,028	-				-0.3
2,388,028	-				-1.0
2,388,028	-				-1.0
2,388,035	-				+1.0
2,388,100	-				+1.6
2,388,117	+				+1.3
2,388,138	+				-1.1
2,388,138	+				-0.4
2,388,138	+				-3.4
2,388,138	+				-0.6
2,388,139	-				-0.5
2,388,139	-				-0.9
2,388,145	+				-1.4
2,388,145	+				-0.5
2,388,145	+				+0.9
2,388,145	+				-1.1
2,388,145	+				-0.4
2,388,145	+				+0.8
2,388,145	+				-1.0
2,388,145	+				-1.5
2,388,145	+				-1.3
2,388,146	-				-1.2
2,388,146	-				-2.1
2,388,146	-				+2.1
2,388,209	+				-0.6
2,388,209	+				-0.9
2,388,209	+				-0.6
2,388,209	+				+0.3
2,388,210	-				-0.8
2,388,210	-				-0.8
2,388,210	-				-0.7
2,388,210	-				+2.0
2,388,210	-				+0.4
2,388,210	-				-2.3
2,388,210	-				+0.0
2,388,210	-				-2.1
2,388,210	-				-1.9
2,388,210	-				-1.5
2,388,270	+				-1.1
2,388,270	+				-1.0
2,388,270	+				-1.0
2,388,270	+				+1.0
2,388,270	+				-1.2
2,388,270	+				-1.3
2,388,270	+				-1.3
2,388,270	+				+3.6
2,388,270	+				+0.2
2,388,271	-				-0.0
2,388,271	-				+1.0
2,388,271	-				-0.9
2,388,271	-				-2.8
2,388,271	-				-0.8
2,388,271	-				+0.3
2,388,271	-				-0.7
2,388,271	-				-0.8
2,388,271	-				-0.3
2,388,320	+		LRK53_RS10685	0.37	+0.4
2,388,320	+		LRK53_RS10685	0.37	-0.5
2,388,321	-		LRK53_RS10685	0.38	-1.0
2,388,321	-		LRK53_RS10685	0.38	-0.1
2,388,321	-		LRK53_RS10685	0.38	-0.8
2,388,347	+		LRK53_RS10685	0.53	-2.0
2,388,347	+		LRK53_RS10685	0.53	-0.4
2,388,347	+		LRK53_RS10685	0.53	-1.4
2,388,347	+		LRK53_RS10685	0.53	-0.5
2,388,347	+		LRK53_RS10685	0.53	-1.1
2,388,347	+		LRK53_RS10685	0.53	-1.8
2,388,347	+		LRK53_RS10685	0.53	-2.7
2,388,347	+		LRK53_RS10685	0.53	+0.8
2,388,348	-		LRK53_RS10685	0.54	+0.1
2,388,348	-		LRK53_RS10685	0.54	-2.7
2,388,348	-		LRK53_RS10685	0.54	-1.5
2,388,348	-		LRK53_RS10685	0.54	-1.4
2,388,348	-		LRK53_RS10685	0.54	+0.4
2,388,348	-		LRK53_RS10685	0.54	+0.2
2,388,348	-		LRK53_RS10685	0.54	-0.4
2,388,350	+		LRK53_RS10685	0.55	+0.0
2,388,350	+		LRK53_RS10685	0.55	-1.0
2,388,350	+		LRK53_RS10685	0.55	-2.4
2,388,350	+		LRK53_RS10685	0.55	+0.6
2,388,351	-		LRK53_RS10685	0.56	-1.1
2,388,351	-		LRK53_RS10685	0.56	-1.8
2,388,351	-		LRK53_RS10685	0.56	-0.8
2,388,351	-		LRK53_RS10685	0.56	-0.2
2,388,351	-		LRK53_RS10685	0.56	-3.0
2,388,351	-		LRK53_RS10685	0.56	+1.0
2,388,351	-		LRK53_RS10685	0.56	-0.8
2,388,351	-		LRK53_RS10685	0.56	-1.3
2,388,351	-		LRK53_RS10685	0.56	-0.6
2,388,446	+				-1.2
2,388,446	+				+1.3
2,388,446	+				+1.5
2,388,446	+				+1.0
2,388,446	+				+0.2
2,388,446	+				+1.6
2,388,446	+				-1.5
2,388,446	+				-1.4
2,388,446	+				-0.9
2,388,446	+				-1.7
2,388,446	+				+0.6
2,388,446	+				-0.8
2,388,446	+				-1.4
2,388,446	+				-1.2
2,388,446	+				-1.0
2,388,446	+				-1.3
2,388,446	+				+1.6
2,388,446	+				+0.7
2,388,446	+				-0.1
2,388,447	-				-1.1
2,388,447	-				+0.0
2,388,447	-				-0.7
2,388,447	-				-2.6
2,388,447	-				-1.4
2,388,447	-				-2.9
2,388,447	-				-2.4
2,388,447	-				-0.8
2,388,447	-				-0.8
2,388,447	-				+1.1
2,388,447	-				+0.6
2,388,447	-				-0.8
2,388,447	-				-4.1
2,388,447	-				+0.2
2,388,447	-				+0.6
2,388,447	-				-0.4
2,388,447	-				-0.8
2,388,447	-				-0.8
2,388,447	-				-2.6
2,388,447	-				-0.0
2,388,447	-				-0.9
2,388,447	-				-1.1
2,388,447	-				+0.6
2,388,447	-				-0.9
2,388,447	-				+1.9
2,388,447	-				+0.1
2,388,447	-				-1.7
2,388,447	-				-1.3
2,388,447	-				-0.6
2,388,558	-				-0.9
2,388,705	+		LRK53_RS10690	0.24	-0.9
2,388,706	-		LRK53_RS10690	0.24	-1.0
2,388,815	+		LRK53_RS10690	0.35	-0.6
2,388,815	+		LRK53_RS10690	0.35	-1.2
2,388,815	+		LRK53_RS10690	0.35	-0.5
2,388,815	+		LRK53_RS10690	0.35	+1.1
2,388,815	+		LRK53_RS10690	0.35	-2.1
2,388,815	+		LRK53_RS10690	0.35	-1.3
2,388,815	+		LRK53_RS10690	0.35	-1.1
2,388,815	+		LRK53_RS10690	0.35	-2.4
2,388,815	+		LRK53_RS10690	0.35	-0.5
2,388,815	+		LRK53_RS10690	0.35	-1.6
2,388,815	+		LRK53_RS10690	0.35	+1.6
2,388,815	+		LRK53_RS10690	0.35	-1.4
2,388,816	-		LRK53_RS10690	0.35	-0.1
2,388,816	-		LRK53_RS10690	0.35	-0.0
2,388,816	-		LRK53_RS10690	0.35	-0.2
2,388,816	-		LRK53_RS10690	0.35	-1.5
2,388,816	-		LRK53_RS10690	0.35	+0.2
2,388,816	-		LRK53_RS10690	0.35	-0.6
2,388,816	-		LRK53_RS10690	0.35	-0.4
2,388,816	-		LRK53_RS10690	0.35	-0.5
2,388,816	-		LRK53_RS10690	0.35	-0.6
2,388,816	-		LRK53_RS10690	0.35	-0.3
2,388,816	-		LRK53_RS10690	0.35	-0.1
2,388,816	-		LRK53_RS10690	0.35	-1.8
2,388,881	+		LRK53_RS10690	0.42	+0.9
2,388,881	+		LRK53_RS10690	0.42	+1.3
2,388,881	+		LRK53_RS10690	0.42	+0.2
2,388,881	+		LRK53_RS10690	0.42	-0.4
2,388,881	+		LRK53_RS10690	0.42	-0.5
2,388,881	+		LRK53_RS10690	0.42	-1.7
2,388,881	+		LRK53_RS10690	0.42	-0.0
2,388,882	-		LRK53_RS10690	0.42	+2.0
2,388,882	-		LRK53_RS10690	0.42	-0.3
2,388,882	-		LRK53_RS10690	0.42	-0.4
2,388,882	-		LRK53_RS10690	0.42	-1.9
2,388,882	-		LRK53_RS10690	0.42	+1.1
2,388,882	-		LRK53_RS10690	0.42	-1.0
2,388,882	-		LRK53_RS10690	0.42	-0.3
2,388,882	-		LRK53_RS10690	0.42	+1.2
2,388,882	-		LRK53_RS10690	0.42	-2.9
2,388,882	-		LRK53_RS10690	0.42	-1.8
2,388,882	-		LRK53_RS10690	0.42	-0.1
2,388,882	-		LRK53_RS10690	0.42	+2.2
2,388,882	-		LRK53_RS10690	0.42	-0.3
2,388,882	-		LRK53_RS10690	0.42	-1.5
2,388,882	-		LRK53_RS10690	0.42	-0.7
2,388,983	-		LRK53_RS10690	0.52	-0.0
2,389,082	+		LRK53_RS10690	0.62	-0.4
2,389,082	+		LRK53_RS10690	0.62	+0.6
2,389,082	+		LRK53_RS10690	0.62	+0.2
2,389,082	+		LRK53_RS10690	0.62	-0.0
2,389,082	+		LRK53_RS10690	0.62	-2.0
2,389,082	+		LRK53_RS10690	0.62	-1.1
2,389,082	+		LRK53_RS10690	0.62	-0.8
2,389,082	+		LRK53_RS10690	0.62	-0.1
2,389,082	+		LRK53_RS10690	0.62	-1.1
2,389,082	+		LRK53_RS10690	0.62	-0.5
2,389,082	+		LRK53_RS10690	0.62	-1.7
2,389,082	+		LRK53_RS10690	0.62	+0.5
2,389,082	+		LRK53_RS10690	0.62	+0.8
2,389,082	+		LRK53_RS10690	0.62	-0.4
2,389,082	+		LRK53_RS10690	0.62	-0.6
2,389,082	+		LRK53_RS10690	0.62	-1.7
2,389,082	+		LRK53_RS10690	0.62	-1.1
2,389,082	+		LRK53_RS10690	0.62	+0.1
2,389,082	+		LRK53_RS10690	0.62	+0.3
2,389,083	-		LRK53_RS10690	0.62	-0.7
2,389,083	-		LRK53_RS10690	0.62	-1.0
2,389,083	-		LRK53_RS10690	0.62	-0.1
2,389,083	-		LRK53_RS10690	0.62	+0.5
2,389,083	-		LRK53_RS10690	0.62	-1.1
2,389,083	-		LRK53_RS10690	0.62	-1.1
2,389,083	-		LRK53_RS10690	0.62	-0.7
2,389,083	-		LRK53_RS10690	0.62	+0.3
2,389,083	-		LRK53_RS10690	0.62	-0.9
2,389,083	-		LRK53_RS10690	0.62	+0.1
2,389,083	-		LRK53_RS10690	0.62	-1.7
2,389,083	-		LRK53_RS10690	0.62	-0.8
2,389,083	-		LRK53_RS10690	0.62	-1.1
2,389,083	-		LRK53_RS10690	0.62	-1.0
2,389,191	-		LRK53_RS10690	0.73	-1.0
2,389,191	-		LRK53_RS10690	0.73	+0.8
2,389,310	+		LRK53_RS10690	0.85	-0.2
2,389,310	+		LRK53_RS10690	0.85	-0.4
2,389,310	+		LRK53_RS10690	0.85	-2.3
2,389,310	+		LRK53_RS10690	0.85	-0.9
2,389,310	+		LRK53_RS10690	0.85	+0.9
2,389,310	+		LRK53_RS10690	0.85	-0.0
2,389,310	+		LRK53_RS10690	0.85	-0.4
2,389,310	+		LRK53_RS10690	0.85	+1.3
2,389,310	+		LRK53_RS10690	0.85	-2.0
2,389,310	+		LRK53_RS10690	0.85	-0.1
2,389,310	+		LRK53_RS10690	0.85	-0.8
2,389,310	+		LRK53_RS10690	0.85	-1.5
2,389,310	+		LRK53_RS10690	0.85	+0.2
2,389,310	+		LRK53_RS10690	0.85	+0.3
2,389,311	-		LRK53_RS10690	0.85	-1.3
2,389,311	-		LRK53_RS10690	0.85	-3.1
2,389,311	-		LRK53_RS10690	0.85	-1.2
2,389,311	-		LRK53_RS10690	0.85	-2.0
2,389,311	-		LRK53_RS10690	0.85	-1.0
2,389,311	-		LRK53_RS10690	0.85	+0.6
2,389,311	-		LRK53_RS10690	0.85	+0.4
2,389,311	-		LRK53_RS10690	0.85	-1.5
2,389,311	-		LRK53_RS10690	0.85	-0.7
2,389,311	-		LRK53_RS10690	0.85	-0.6
2,389,311	-		LRK53_RS10690	0.85	-0.6
2,389,311	-		LRK53_RS10690	0.85	-0.8
2,389,311	-		LRK53_RS10690	0.85	+0.6
2,389,311	-		LRK53_RS10690	0.85	-0.5
2,389,311	-		LRK53_RS10690	0.85	-0.5
2,389,314	+		LRK53_RS10690	0.85	-1.6
2,389,314	+		LRK53_RS10690	0.85	-0.2
2,389,314	+		LRK53_RS10690	0.85	+1.1
2,389,315	-		LRK53_RS10690	0.85	+1.8
2,389,315	-		LRK53_RS10690	0.85	-0.0
2,389,315	-		LRK53_RS10690	0.85	+0.5
2,389,315	-		LRK53_RS10690	0.85	-1.9
2,389,315	-		LRK53_RS10690	0.85	+2.2
2,389,315	-		LRK53_RS10690	0.85	-0.6
2,389,484	-				-2.2
2,389,484	-				-0.0
2,389,517	+				+0.2
2,389,518	-				+0.1
2,389,541	+				+2.3
2,389,541	+				+1.1
2,389,559	+				-0.1
2,389,559	+				-0.8
2,389,559	+				-0.6
2,389,559	+				+0.5
2,389,559	+				-0.8
2,389,559	+				+0.5
2,389,559	+				-1.3
2,389,559	+				-0.7
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2,389,560	-				-3.5
2,389,560	-				-1.1
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2,389,989	-		LRK53_RS10695	0.21	-1.1
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2,390,271	+		LRK53_RS10695	0.44	-1.1
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2,390,272	-		LRK53_RS10695	0.44	+1.0
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2,390,272	-		LRK53_RS10695	0.44	-1.1
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2,390,295	-		LRK53_RS10695	0.46	-1.1
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2,390,412	-		LRK53_RS10695	0.55	-1.1
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2,390,412	-		LRK53_RS10695	0.55	+0.9
2,390,412	-		LRK53_RS10695	0.55	+0.3
2,390,412	-		LRK53_RS10695	0.55	-3.1
2,390,412	-		LRK53_RS10695	0.55	-0.3
2,390,412	-		LRK53_RS10695	0.55	+1.1
2,390,412	-		LRK53_RS10695	0.55	-1.0
2,390,412	-		LRK53_RS10695	0.55	-0.0
2,390,412	-		LRK53_RS10695	0.55	+1.8
2,390,412	-		LRK53_RS10695	0.55	+0.9
2,390,412	-		LRK53_RS10695	0.55	-0.9