Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04630

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,078,512	-				-0.5
1,078,517	+				-1.6
1,078,517	+				-1.1
1,078,517	+				-0.4
1,078,517	+				+0.6
1,078,517	+				-1.5
1,078,517	+				-1.8
1,078,518	-				-1.9
1,078,518	-				-1.1
1,078,518	-				-0.3
1,078,518	-				+0.1
1,078,518	-				+0.4
1,078,518	-				-1.0
1,078,582	-				+1.4
1,078,582	-				-0.0
1,078,941	+				+0.1
1,078,941	+				-0.8
1,078,942	-				-1.3
1,078,981	+				+1.7
1,078,981	+				-1.3
1,078,981	+				-1.7
1,078,981	+				-0.6
1,078,982	-				+2.4
1,079,068	+		LRK53_RS04630	0.10	+1.0
1,079,068	+		LRK53_RS04630	0.10	+0.4
1,079,069	-		LRK53_RS04630	0.10	-2.3
1,079,091	-		LRK53_RS04630	0.13	-2.5
1,079,100	+		LRK53_RS04630	0.14	+0.6
1,079,101	-		LRK53_RS04630	0.14	+0.0
1,079,152	+		LRK53_RS04630	0.20	+0.1
1,079,152	+		LRK53_RS04630	0.20	-1.4
1,079,152	+		LRK53_RS04630	0.20	+1.1
1,079,152	+		LRK53_RS04630	0.20	-0.7
1,079,152	+		LRK53_RS04630	0.20	-0.9
1,079,152	+		LRK53_RS04630	0.20	+0.9
1,079,153	-		LRK53_RS04630	0.20	-1.1
1,079,153	-		LRK53_RS04630	0.20	+0.1
1,079,153	-		LRK53_RS04630	0.20	+0.1
1,079,179	+		LRK53_RS04630	0.23	-0.8
1,079,179	+		LRK53_RS04630	0.23	-1.7
1,079,180	-		LRK53_RS04630	0.23	-0.5
1,079,235	-		LRK53_RS04630	0.29	-0.6
1,079,235	-		LRK53_RS04630	0.29	+1.9
1,079,235	-		LRK53_RS04630	0.29	+1.2
1,079,266	-		LRK53_RS04630	0.33	+0.1
1,079,266	-		LRK53_RS04630	0.33	+0.1
1,079,266	-		LRK53_RS04630	0.33	-2.6
1,079,325	+		LRK53_RS04630	0.40	-0.4
1,079,325	+		LRK53_RS04630	0.40	+0.7
1,079,326	-		LRK53_RS04630	0.40	-0.2
1,079,326	-		LRK53_RS04630	0.40	+0.3
1,079,326	-		LRK53_RS04630	0.40	-0.5
1,079,419	-		LRK53_RS04630	0.50	-0.9
1,079,427	-		LRK53_RS04630	0.51	-1.7
1,079,428	+		LRK53_RS04630	0.51	-0.3
1,079,428	+		LRK53_RS04630	0.51	+1.9
1,079,429	-		LRK53_RS04630	0.52	-0.4
1,079,429	-		LRK53_RS04630	0.52	-1.0
1,079,450	+		LRK53_RS04630	0.54	+1.1
1,079,467	+		LRK53_RS04630	0.56	+1.3
1,079,467	+		LRK53_RS04630	0.56	+0.9
1,079,467	+		LRK53_RS04630	0.56	-0.4
1,079,467	+		LRK53_RS04630	0.56	-0.2
1,079,483	+		LRK53_RS04630	0.58	-0.1
1,079,483	+		LRK53_RS04630	0.58	+1.1
1,079,483	+		LRK53_RS04630	0.58	-1.2
1,079,564	+		LRK53_RS04630	0.67	+0.8
1,079,564	+		LRK53_RS04630	0.67	-1.2
1,079,565	-		LRK53_RS04630	0.67	+1.6
1,079,599	+		LRK53_RS04630	0.71	-0.3
1,079,599	+		LRK53_RS04630	0.71	-0.1
1,079,599	+		LRK53_RS04630	0.71	-1.8
1,079,674	+		LRK53_RS04630	0.80	+0.2
1,079,675	-		LRK53_RS04630	0.80	-0.8
1,079,675	-		LRK53_RS04630	0.80	+1.1
1,079,677	+		LRK53_RS04630	0.80	-0.6
1,079,712	+		LRK53_RS04630	0.84	-1.3
1,079,721	+		LRK53_RS04630	0.85	+0.9
1,079,722	-		LRK53_RS04630	0.85	-1.0
1,079,775	+				-0.1
1,079,776	-				-1.2
1,079,874	-				-1.3
1,079,910	+				-0.4
1,079,931	+				+0.7
1,079,931	+				-1.3
1,079,931	+				-1.9
1,079,988	+				-0.1
1,079,988	+				+0.1
1,080,011	+				-0.8
1,080,011	+				+0.2
1,080,011	+				-0.1
1,080,012	-				+1.3
1,080,012	-				+0.7
1,080,012	-				-0.8
1,080,012	-				-0.4
1,080,012	-				-1.5
1,080,012	-				-2.6
1,080,012	-				-0.7
1,080,191	-		LRK53_RS04635	0.22	-1.2
1,080,191	-		LRK53_RS04635	0.22	+0.7
1,080,191	-		LRK53_RS04635	0.22	+0.2
1,080,191	-		LRK53_RS04635	0.22	+0.7
1,080,191	-		LRK53_RS04635	0.22	-0.1
1,080,191	-		LRK53_RS04635	0.22	-0.9
1,080,191	-		LRK53_RS04635	0.22	-0.3
1,080,191	-		LRK53_RS04635	0.22	-0.3
1,080,191	-		LRK53_RS04635	0.22	-1.9
1,080,191	-		LRK53_RS04635	0.22	-0.4
1,080,191	-		LRK53_RS04635	0.22	+1.6
1,080,191	-		LRK53_RS04635	0.22	+0.3
1,080,191	-		LRK53_RS04635	0.22	+1.1
1,080,191	-		LRK53_RS04635	0.22	-0.4
1,080,191	-		LRK53_RS04635	0.22	-1.7
1,080,191	-		LRK53_RS04635	0.22	+1.3
1,080,191	-		LRK53_RS04635	0.22	-0.3
1,080,191	-		LRK53_RS04635	0.22	+0.5
1,080,191	-		LRK53_RS04635	0.22	-0.7
1,080,279	+		LRK53_RS04635	0.34	+0.5
1,080,279	+		LRK53_RS04635	0.34	-1.3
1,080,279	+		LRK53_RS04635	0.34	-1.2
1,080,280	-		LRK53_RS04635	0.34	-1.2
1,080,280	-		LRK53_RS04635	0.34	-2.8
1,080,327	+		LRK53_RS04635	0.40	+1.5
1,080,327	+		LRK53_RS04635	0.40	-0.6
1,080,327	+		LRK53_RS04635	0.40	-0.5
1,080,327	+		LRK53_RS04635	0.40	-3.1
1,080,328	-		LRK53_RS04635	0.41	-2.4
1,080,328	-		LRK53_RS04635	0.41	+1.3
1,080,328	-		LRK53_RS04635	0.41	-0.4
1,080,328	-		LRK53_RS04635	0.41	+0.1
1,080,330	+		LRK53_RS04635	0.41	-0.3
1,080,330	+		LRK53_RS04635	0.41	-1.9
1,080,330	+		LRK53_RS04635	0.41	-0.7
1,080,330	+		LRK53_RS04635	0.41	-1.1
1,080,330	+		LRK53_RS04635	0.41	-2.2
1,080,330	+		LRK53_RS04635	0.41	-0.5
1,080,330	+		LRK53_RS04635	0.41	-1.0
1,080,330	+		LRK53_RS04635	0.41	+0.7
1,080,330	+		LRK53_RS04635	0.41	-1.0
1,080,331	-		LRK53_RS04635	0.41	-0.2
1,080,331	-		LRK53_RS04635	0.41	+1.9
1,080,331	-		LRK53_RS04635	0.41	-0.4
1,080,331	-		LRK53_RS04635	0.41	-1.8
1,080,331	-		LRK53_RS04635	0.41	+0.1
1,080,331	-		LRK53_RS04635	0.41	+0.1
1,080,480	-		LRK53_RS04635	0.62	-1.5
1,080,480	-		LRK53_RS04635	0.62	-0.9
1,080,480	-		LRK53_RS04635	0.62	-0.3
1,080,511	+		LRK53_RS04635	0.66	-1.9
1,080,700	+				-1.8
1,080,700	+				-1.5
1,080,700	+				-0.4
1,080,701	-				-3.2
1,080,772	+				-0.6
1,080,772	+				-0.6
1,080,772	+				+0.9
1,080,772	+				-1.4
1,080,773	-				-0.2
1,080,773	-				-0.6
1,080,773	-				+0.0
1,080,773	-				+0.0
1,080,773	-				-0.3
1,080,773	-				-0.4
1,080,773	-				+0.4
1,080,773	-				-0.6
1,080,773	-				-1.3
1,080,798	-				-0.0
1,080,824	+				+0.7
1,080,825	-				+0.6
1,080,837	+				-1.0
1,080,837	+				-0.7
1,080,838	-				-0.4
1,080,838	-				+0.1
1,080,838	-				-0.4