Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03963

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
4,446,694	+				+0.6
4,446,739	+				+0.6
4,446,739	+				+1.6
4,446,764	+				+0.8
4,446,764	+				-1.0
4,446,764	+				+0.3
4,446,765	-				+0.8
4,446,794	+				+0.9
4,446,807	-				+0.6
4,446,837	+		MIT1002_03962	0.12	-0.1
4,446,872	-		MIT1002_03962	0.16	+0.7
4,446,873	-		MIT1002_03962	0.16	+1.0
4,446,927	+		MIT1002_03962	0.24	+0.2
4,446,985	+		MIT1002_03962	0.31	+0.2
4,446,985	+		MIT1002_03962	0.31	-1.8
4,446,985	+		MIT1002_03962	0.31	-0.1
4,447,003	-		MIT1002_03962	0.34	-0.3
4,447,003	-		MIT1002_03962	0.34	-0.0
4,447,038	+		MIT1002_03962	0.38	-0.2
4,447,119	+		MIT1002_03962	0.49	-0.1
4,447,129	+		MIT1002_03962	0.50	+0.9
4,447,185	-		MIT1002_03962	0.58	-1.4
4,447,251	+		MIT1002_03962	0.67	+0.2
4,447,263	+		MIT1002_03962	0.68	-1.6
4,447,263	+		MIT1002_03962	0.68	-1.4
4,447,270	+		MIT1002_03962	0.69	+0.1
4,447,271	-		MIT1002_03962	0.69	+0.1
4,447,351	-		MIT1002_03962	0.80	+0.1
4,447,386	-		MIT1002_03962	0.84	+0.5
4,447,465	+				+1.8
4,447,465	+				+0.3
4,447,465	+				+0.4
4,447,473	-				+0.2
4,447,473	-				+0.5
4,447,501	+				-0.8
4,447,524	-				+0.4
4,447,577	-				+1.3
4,447,588	+				+1.0
4,447,690	-				-0.3
4,447,743	-				-0.6
4,447,813	+		MIT1002_03963	0.19	-0.3
4,447,820	+		MIT1002_03963	0.19	+2.5
4,447,826	-		MIT1002_03963	0.20	+1.4
4,447,826	-		MIT1002_03963	0.20	-0.2
4,447,930	-		MIT1002_03963	0.34	-1.4
4,447,975	+		MIT1002_03963	0.40	-0.5
4,447,980	+		MIT1002_03963	0.40	-0.9
4,447,998	-		MIT1002_03963	0.43	+1.1
4,448,037	-		MIT1002_03963	0.48	-1.6
4,448,140	+		MIT1002_03963	0.61	-0.0
4,448,251	+		MIT1002_03963	0.76	+0.7
4,448,259	-		MIT1002_03963	0.77	+0.1
4,448,311	+		MIT1002_03963	0.84	-0.4
4,448,311	+		MIT1002_03963	0.84	-1.6
4,448,319	-		MIT1002_03963	0.85	+0.3
4,448,351	+		MIT1002_03963	0.89	+0.0
4,448,359	-				+0.1
4,448,391	+				+0.2
4,448,399	-				-0.9
4,448,399	-				-0.3
4,448,406	-				+2.6
4,448,406	-				+0.9
4,448,406	-				-0.6
4,448,410	+				-0.3
4,448,426	-				+1.2
4,448,627	-				+0.4
4,448,643	+				+0.5
4,448,740	+		MIT1002_03964	0.16	+0.1
4,448,815	-		MIT1002_03964	0.24	+1.2
4,448,843	+		MIT1002_03964	0.27	+2.2
4,448,851	-		MIT1002_03964	0.28	+0.9
4,448,888	+		MIT1002_03964	0.32	+0.2
4,448,896	-		MIT1002_03964	0.33	-0.4
4,448,907	+		MIT1002_03964	0.34	-0.3
4,449,086	-		MIT1002_03964	0.53	-0.5
4,449,141	+		MIT1002_03964	0.59	+0.0
4,449,214	+		MIT1002_03964	0.67	-1.6
4,449,221	+		MIT1002_03964	0.67	+0.8
4,449,223	+		MIT1002_03964	0.68	+1.8
4,449,224	+		MIT1002_03964	0.68	+0.0
4,449,227	-		MIT1002_03964	0.68	+0.3
4,449,275	+		MIT1002_03964	0.73	+0.6
4,449,366	+		MIT1002_03964	0.83	+0.7
4,449,374	-		MIT1002_03964	0.84	-2.8
4,449,374	-		MIT1002_03964	0.84	+0.4
4,449,407	-		MIT1002_03964	0.87	+1.4
4,449,422	+		MIT1002_03964	0.89	+0.3