Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03871

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
4,336,744	+		MIT1002_03869	0.21	-0.1
4,336,990	-				+0.0
4,336,995	-				-0.0
4,337,062	+				-0.8
4,337,062	+				-0.2
4,337,070	-				-0.1
4,337,128	+		MIT1002_03870	0.15	-2.2
4,337,129	-		MIT1002_03870	0.15	+0.2
4,337,207	+		MIT1002_03870	0.30	+0.0
4,337,215	-		MIT1002_03870	0.31	+1.3
4,337,233	+		MIT1002_03870	0.35	+1.5
4,337,243	-		MIT1002_03870	0.37	+0.3
4,337,258	+		MIT1002_03870	0.39	+0.1
4,337,281	-		MIT1002_03870	0.44	+0.7
4,337,281	-		MIT1002_03870	0.44	-0.3
4,337,281	-		MIT1002_03870	0.44	-1.0
4,337,317	+		MIT1002_03870	0.51	-0.4
4,337,323	-		MIT1002_03870	0.52	+1.2
4,337,347	-		MIT1002_03870	0.57	+0.2
4,337,357	-		MIT1002_03870	0.58	-0.9
4,337,392	+		MIT1002_03870	0.65	-0.4
4,337,403	+		MIT1002_03870	0.67	-0.8
4,337,409	+		MIT1002_03870	0.68	+0.1
4,337,422	-		MIT1002_03870	0.71	+0.0
4,337,509	-		MIT1002_03870	0.88	+0.6
4,337,509	-		MIT1002_03870	0.88	-0.3
4,337,644	-				-0.5
4,337,722	-		MIT1002_03871	0.19	-0.7
4,338,006	-		MIT1002_03871	0.53	+0.5
4,338,150	+		MIT1002_03871	0.70	-1.2
4,338,165	-		MIT1002_03871	0.72	-0.7
4,338,167	-		MIT1002_03871	0.72	+0.3
4,338,422	-				+0.7
4,338,522	+		MIT1002_03872	0.25	-0.1
4,338,545	+		MIT1002_03872	0.29	-0.8
4,338,553	-		MIT1002_03872	0.31	+0.3
4,338,564	+		MIT1002_03872	0.33	-1.0
4,338,564	+		MIT1002_03872	0.33	+0.7
4,338,583	+		MIT1002_03872	0.37	+1.0
4,338,631	-		MIT1002_03872	0.47	-0.1
4,338,631	-		MIT1002_03872	0.47	+0.3
4,338,632	-		MIT1002_03872	0.47	+0.6
4,338,684	+		MIT1002_03872	0.57	-0.1
4,338,705	+		MIT1002_03872	0.61	-1.1
4,338,705	+		MIT1002_03872	0.61	+0.5
4,338,705	+		MIT1002_03872	0.61	+0.7
4,338,705	+		MIT1002_03872	0.61	+0.5
4,338,713	-		MIT1002_03872	0.63	+0.2
4,338,742	-		MIT1002_03872	0.69	-0.4
4,338,874	+				-0.1
4,338,924	-				+2.2
4,338,935	-				+0.1
4,338,935	-				+1.7
4,338,982	-				+1.1
4,338,994	+				+0.6
4,338,994	+				-3.0
4,338,994	+				+0.6
4,339,000	-				+0.4
4,339,002	-				-0.1
4,339,002	-				+0.2
4,339,023	-				-0.0
4,339,041	+				+1.0
4,339,041	+				-0.5
4,339,041	+				+0.2
4,339,049	-				+0.1
4,339,072	+				+1.7
4,339,072	+				+1.2
4,339,080	-				-0.6
4,339,089	+				+0.7
4,339,089	+				-0.6
4,339,089	-				-0.3
4,339,117	+				-0.4
4,339,162	-				+0.2
4,339,249	+				-0.5